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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_0735 and Psyr_0736 overlap by 14 nucleotides
Psyr_0736 and Psyr_0737 are separated by 213 nucleotides
Psyr_0737 and Psyr_0738 are separated by 794 nucleotides
Psyr_0738 and Psyr_0739 are separated by 331 nucleotides
Psyr_0735: Psyr_0735 - Peptidase S24, S26A and S26B, at 840,487 to 840,921
_0735
Psyr_0736: Psyr_0736 - umuC protein, at 840,908 to 841,153
_0736
Psyr_0737: Psyr_0737 - putative transmembrane protein, at 841,367 to 841,780
_0737
Psyr_0738: Psyr_0738 - type III effector protein AvrRpm1, at 842,575 to 843,261
_0738
Psyr_0739: Psyr_0739 - CDS, at 843,593 to 844,246
_0739
Group
Condition
Psyr
_0735
Psyr
_0736
Psyr
_0737
Psyr
_0738
Psyr
_0739
stress
KB with Mitomycin C 0.05 ug/ml
-1.1
-2.4
-0.2
-0.2
-0.4
stress
KB with Carbenicillin 3.1 ug/ml
-1.2
-0.5
-0.4
-0.4
-0.2
stress
KB with Tetracycline 0.0015 ug/ml
-0.2
-1.7
-0.4
-0.1
-0.2
stress
KB with Nitrofurantoin 31.25 ug/ml
-0.5
-1.4
-0.4
-0.2
+0.2
stress
KB with Nalidixic 0.775 ug/ml
-0.3
-1.2
-0.5
-0.1
-0.1
stress
KB with Harmine 10 mM
-0.8
-0.5
-0.2
-0.3
-0.1
stress
KB with Phloretin 125 ug/ml
-0.6
-0.7
-0.3
-0.2
-0.0
stress
KB with Acriflavine 1.25 ug/ml
-0.5
-1.0
-0.4
+0.0
+0.2
stress
KB with Levodopa 10 mM
-0.5
-0.5
+0.2
-0.3
-0.6
stress
KB with Sinomenine 10 mM
-0.7
-0.7
-0.2
-0.0
-0.0
stress
KB with Novobiocin 7.75 ug/ml
-0.5
-0.3
-0.2
-0.6
-0.0
stress
KB with Erythromycin 6.25 ug/ml
-0.8
-0.3
-0.4
-0.4
+0.2
stress
KB with Escin 10 mM
-0.7
-0.9
-0.2
+0.0
+0.2
stress
KB with Hydrastine (1R, 9S) 10 mM
-0.2
-0.7
-0.2
-0.2
-0.2
kb
KB
-0.1
-1.0
-0.4
-0.0
-0.1
stress
KB with Benzalkonium chloride 1.55 ug/ml
-0.6
-0.7
-0.2
-0.2
+0.2
stress
KB with Oxedrine 10 mM
-1.3
-0.1
-0.0
-0.1
+0.1
stress
KB with Trimethoprim 15.6 ug/ml
-0.2
-0.6
-0.6
-0.2
+0.2
in planta
epiphytic; Lima bean
+0.1
-0.8
+0.2
-0.4
-0.3
stress
KB with Methyl-2-Hydroxy-Phenylproprionate 10 mM
-0.5
-0.4
-0.4
-0.0
+0.2
stress
KB with Acridine orange 3.125 ug/ml
-0.5
-0.4
+0.2
+0.2
-0.4
stress
KB with Anabasine Hydrochloride 10 mM
-0.5
-0.9
-0.0
-0.0
+0.5
stress
KB with Gossypol-Acetic Acid Complex 10 mM
-0.7
-0.1
-0.1
-0.3
+0.3
in planta
epiphytic; Lima bean
+0.2
-1.6
+0.2
+0.4
+0.1
stress
KB with Harmol 10 mM
+0.5
-0.6
-0.3
-0.1
-0.1
stress
KB with Solanesol 10 mM
+0.6
-0.4
-0.1
-0.1
-0.5
in planta
apoplastic, chopping recovery; Green bean
+0.2
+0.4
-0.3
-0.1
-0.6
in planta
Green bean; epiphytic
+0.4
-0.6
-0.4
+0.3
+0.1
in planta
apoplastic, chopping recovery; Green bean
+0.7
+0.6
-0.5
-0.1
-0.3
stress
KB with Totarol 10 mM
+0.5
+0.3
+0.3
-0.2
+0.1
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