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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_0664 and Psyr_0665 are separated by 4 nucleotides
Psyr_0665 and Psyr_0666 overlap by 4 nucleotides
Psyr_0666 and Psyr_0667 are separated by 0 nucleotides
Psyr_0667 and Psyr_0668 are separated by 264 nucleotides
Psyr_0664: Psyr_0664 - ABC transporter, at 752,808 to 753,599
_0664
Psyr_0665: Psyr_0665 - transport system permease protein, at 753,604 to 754,572
_0665
Psyr_0666: Psyr_0666 - transport system permease protein, at 754,569 to 755,558
_0666
Psyr_0667: Psyr_0667 - Periplasmic binding protein, at 755,559 to 756,479
_0667
Psyr_0668: Psyr_0668 - Sodium/calcium exchanger membrane region, at 756,744 to 757,847
_0668
Group
Condition
Psyr
_0664
Psyr
_0665
Psyr
_0666
Psyr
_0667
Psyr
_0668
in planta
epiphytic; Lima bean
-1.0
-0.0
-0.4
-0.2
-0.3
stress
KB with Sclareolide 10 mM
-0.3
+0.3
-1.4
+0.0
+0.0
stress
KB with Terpene 10 mM
-1.0
+0.0
-0.2
+0.1
-0.1
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-0.6
-0.2
-0.2
+0.1
-0.1
stress
KB with Palmatine 10 mM
-0.8
+0.2
+0.2
-0.0
-0.6
stress
KB with Nitrofurantoin 0.0625 mg/ml
-0.4
-0.2
+0.3
-0.0
-0.5
in planta
epiphytic; Lima bean
-1.2
+0.3
+0.1
+0.1
+0.0
stress
KB with Gossypetin 10 mM
-0.8
-0.1
+0.0
+0.2
-0.0
stress
KB with d-limonene 10 mM
-0.7
+0.3
+0.0
-0.2
-0.0
stress
KB with Acriflavine 1.25 ug/ml
+0.2
+0.2
-0.4
-0.1
-0.4
stress
KB with capsaicin 0.25 mg/ml
-0.4
-0.0
+0.4
-0.1
-0.3
stress
KB with Acridine orange 3.125 ug/ml
-0.4
+0.2
-0.4
+0.2
-0.0
in planta
apoplastic, chopping recovery; Green bean
-0.3
-0.1
+0.2
+0.2
-0.4
in planta
apoplastic, chopping recovery; Green bean
+0.2
-0.2
-0.1
+0.4
-0.6
in planta
Green bean; epiphytic
-0.6
+0.2
+0.3
+0.1
-0.2
stress
KB with Prenyletin 10 mM
-0.7
+0.0
+0.2
+0.2
+0.0
in planta
apoplastic, chopping recovery; Green bean
+0.1
-0.5
+0.1
+0.3
-0.2
stress
KB with Dimethyl Sulfoxide 0.42 vol%
-0.7
+0.2
+0.6
+0.1
-0.1
stress
KB with Erythromycin 6.25 ug/ml
-0.6
+0.3
+0.7
-0.0
-0.2
stress
KB with Tetracycline 0.0015 ug/ml
+0.2
+0.1
+0.4
+0.1
-0.4
stress
KB with Veratrine 10 mM
+0.6
+0.1
-0.3
+0.1
-0.1
stress
KB with Nalidixic 0.775 ug/ml
-0.3
+0.2
+0.6
-0.0
-0.0
stress
KB with Oxonitine 10 mM
+0.1
+0.2
+0.5
+0.1
-0.5
stress
KB with Quercetin 360 ug/ml
+0.7
-0.1
-0.1
+0.2
-0.2
stress
KB with Oxedrine 10 mM
+0.3
+0.0
+0.3
+0.2
-0.3
stress
KB with Benzalkonium chloride 1.55 ug/ml
+0.5
-0.1
+0.3
+0.1
-0.2
stress
KB with Sinomenine 10 mM
+0.0
+0.3
+0.6
-0.1
-0.2
in planta
apoplastic; Green bean; 6 days
+0.5
+0.3
-0.2
-0.1
+0.2
stress
KB with Anabasine Hydrochloride 10 mM
+0.2
+0.3
+0.5
-0.0
-0.2
stress
KB with Piperine 10 mM
+0.2
+0.3
+0.6
+0.2
-0.0
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