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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_0575 and Psyr_0576 are separated by 270 nucleotides
Psyr_0576 and Psyr_0577 are separated by 54 nucleotides
Psyr_0577 and Psyr_0578 are separated by 171 nucleotides
Psyr_0578 and Psyr_RNA2 are separated by 106 nucleotides
Psyr_0575: Psyr_0575 - protease FtsH subunit HflC, at 653,492 to 654,361
_0575
Psyr_0576: Psyr_0576 - ATP phosphoribosyltransferase regulatory subunit, putative, at 654,632 to 655,819
_0576
Psyr_0577: Psyr_0577 - Adenylosuccinate synthetase, at 655,874 to 657,166
_0577
Psyr_0578: Psyr_0578 - Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer, at 657,338 to 659,272
_0578
Psyr_RNA2: Psyr_RNA2 - tRNA-Leu, at 659,379 to 659,465
_RNA2
Group
Condition
Psyr
_0575
Psyr
_0576
Psyr
_0577
Psyr
_0578
Psyr
_RNA2
in planta
apoplastic, chopping recovery; Green bean
-1.6
-3.4
N.D.
-0.3
N.D.
in planta
apoplastic, chopping recovery; Green bean
-1.1
-3.4
N.D.
-0.3
N.D.
in planta
apoplastic, chopping recovery; Green bean
-1.8
-2.7
N.D.
-0.2
N.D.
in planta
apoplastic, chopping recovery; Green bean
-1.4
-2.6
N.D.
-0.3
N.D.
stress
KB with Harmol 10 mM
-3.7
-0.2
N.D.
-0.2
N.D.
in planta
epiphytic; Lima bean
-1.5
-2.1
N.D.
-0.2
N.D.
in planta
apoplastic; Green bean; 6 days
-0.8
-3.0
N.D.
+0.1
N.D.
stress
KB with Curcumin 10 mM
-3.2
-0.3
N.D.
-0.0
N.D.
in planta
apoplastic; Green bean; 6 days
-0.7
-2.9
N.D.
+0.1
N.D.
stress
KB with Lawsone 10 mM
-3.3
-0.1
N.D.
-0.1
N.D.
stress
KB with Levodopa 10 mM
-4.1
+0.8
N.D.
-0.1
N.D.
stress
KB with Chrysophanol 10 mM
-2.8
-0.4
N.D.
-0.1
N.D.
in planta
epiphytic; Lima bean
-0.2
-2.7
N.D.
-0.1
N.D.
stress
KB with Sclareolide 10 mM
-2.8
-0.2
N.D.
+0.1
N.D.
stress
KB with Emodin 10 mM
-2.1
-0.6
N.D.
-0.2
N.D.
stress
KB with Avocadyne 10 mM
-3.0
+0.0
N.D.
+0.1
N.D.
stress
KB with Gossypetin 10 mM
-3.2
+0.3
N.D.
+0.0
N.D.
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-2.4
-0.2
N.D.
-0.1
N.D.
stress
KB with Terpene 10 mM
-2.4
-0.3
N.D.
+0.0
N.D.
stress
KB with Palmatine chloride 10 mM
-3.0
+0.4
N.D.
+0.0
N.D.
stress
KB with Nonanoic 10 mM
-1.7
-0.9
N.D.
+0.1
N.D.
stress
KB with Helenine 10 mM
-2.9
+0.2
N.D.
+0.1
N.D.
stress
KB with Anethole 10 mM
-2.2
-0.5
N.D.
+0.1
N.D.
stress
KB with Acriflavine 1.25 ug/ml
-2.6
+0.3
N.D.
-0.0
N.D.
in planta
Green bean; epiphytic
+0.2
-2.5
N.D.
+0.1
N.D.
stress
KB with Usnic Acid 10 mM
-2.5
+0.3
N.D.
+0.1
N.D.
stress
KB with Palmatine 10 mM
-3.0
+0.8
N.D.
+0.1
N.D.
stress
KB with Harmine 10 mM
-2.1
+0.5
N.D.
-0.2
N.D.
stress
KB with Acridine orange 3.125 ug/ml
-2.4
+0.7
N.D.
-0.1
N.D.
stress
KB with Solanesol 10 mM
-2.2
+0.6
N.D.
-0.1
N.D.
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