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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_0510 and Psyr_0511 are separated by 26 nucleotides
Psyr_0511 and Psyr_0512 are separated by 7 nucleotides
Psyr_0512 and Psyr_0513 are separated by 226 nucleotides
Psyr_0513 and Psyr_0514 overlap by 38 nucleotides
Psyr_0510: Psyr_0510 - conserved hypothetical protein, at 566,818 to 567,342
_0510
Psyr_0511: Psyr_0511 - conserved hypothetical protein, at 567,369 to 567,665
_0511
Psyr_0512: Psyr_0512 - GCN5-related N-acetyltransferase, at 567,673 to 568,131
_0512
Psyr_0513: Psyr_0513 - amino acid ABC transporter substrate-binding protein, PAAT family, at 568,358 to 569,113
_0513
Psyr_0514: Psyr_0514 - Intergral membrane protein, YccS:Integral membrane protein, YccS/YhfK, at 569,076 to 571,274
_0514
Group
Condition
Psyr
_0510
Psyr
_0511
Psyr
_0512
Psyr
_0513
Psyr
_0514
in planta
epiphytic; Lima bean
-0.8
+0.1
-0.2
-0.2
-0.1
in planta
Green bean; epiphytic
-1.1
+0.1
+0.3
-0.2
-0.0
stress
KB with Palmatine 10 mM
-0.7
-0.6
+0.1
-0.0
+0.4
stress
KB with Oxonitine 10 mM
-0.8
-0.1
+0.1
-0.1
+0.1
stress
KB with Rotenone 0.125 mg/ml
-0.7
+0.1
+0.2
-0.1
-0.2
stress
KB with Rifampicin 0.1 mg/ml
-0.3
-0.2
+0.3
-0.0
-0.3
stress
KB with Gamma-Aminobutyric Acid Hydrochloride 10 mM
-0.5
-0.1
+0.0
-0.1
+0.2
in planta
apoplastic, chopping recovery; Green bean
+0.3
-0.3
-0.4
+0.1
-0.1
stress
KB with Biochanin a diacetate 10 mM
-0.7
+0.1
+0.2
-0.1
+0.2
in planta
apoplastic, chopping recovery; Green bean
+0.4
-0.3
-0.4
+0.3
-0.3
stress
KB with Lawsone 10 mM
-0.8
-0.1
+0.2
+0.2
+0.4
stress
KB with Prenyletin 10 mM
-0.5
-0.2
+0.3
+0.2
+0.2
stress
KB with Auraptene 10 mM
-0.5
+0.1
+0.3
+0.1
+0.2
stress
KB with Chloramphenicol 1.55 ug/ml
+0.6
-0.5
-0.1
+0.1
+0.2
in planta
Green bean; epiphytic
+0.4
+0.1
+0.2
-0.2
-0.1
stress
KB with Ampicillin 0.775 ug/ml
+0.8
-0.1
-0.1
+0.0
-0.1
stress
KB with Acriflavine 1.25 ug/ml
+0.5
-0.4
+0.2
+0.0
+0.3
kb
KB
+0.5
-0.2
+0.0
+0.2
+0.2
stress
KB with L-alliin 10 mM
+0.4
-0.1
+0.2
-0.1
+0.3
stress
KB with Acridine orange 3.125 ug/ml
-0.0
-0.2
-0.3
+0.4
+0.9
stress
KB with Totarol 10 mM
+0.5
-0.1
+0.4
-0.2
+0.3
stress
KB with Levodopa 10 mM
+0.5
-0.2
+0.4
+0.0
+0.2
stress
KB with Hydrastine (1R, 9S) 10 mM
+0.7
-0.1
+0.2
+0.0
+0.1
stress
KB with Mitomycin C 0.05 ug/ml
+0.7
-0.2
+0.0
-0.1
+0.6
stress
KB with Harmol 10 mM
+0.2
-0.2
+0.2
+0.1
+0.6
stress
KB with Chaulmoogric 10 mM
+0.2
+0.1
+0.4
+0.1
+0.4
stress
KB with Trimethoprim 15.6 ug/ml
+0.7
+0.0
-0.1
+0.3
+0.3
stress
KB with Berberine 15.6 ug/ml
+0.6
-0.4
+0.1
+0.2
+0.8
stress
KB with Nitrofurantoin 31.25 ug/ml
+0.8
-0.0
+0.2
+0.2
+0.2
stress
KB with Quercetin 360 ug/ml
+0.4
+0.3
+0.3
+0.1
+0.3
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