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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_0490 and Psyr_0491 are separated by 50 nucleotides
Psyr_0491 and Psyr_0492 are separated by 47 nucleotides
Psyr_0492 and Psyr_0493 overlap by 8 nucleotides
Psyr_0493 and Psyr_0494 are separated by 121 nucleotides
Psyr_0490: Psyr_0490 - CheW-like protein, at 526,311 to 526,850
_0490
Psyr_0491: Psyr_0491 - chemotaxis sensory transducer, at 526,901 to 528,943
_0491
Psyr_0492: Psyr_0492 - Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt, at 528,991 to 534,969
_0492
Psyr_0493: Psyr_0493 - CheW-like protein, at 534,962 to 535,432
_0493
Psyr_0494: Psyr_0494 - Protein of unknown function UPF0061, at 535,554 to 537,017
_0494
Group
Condition
Psyr
_0490
Psyr
_0491
Psyr
_0492
Psyr
_0493
Psyr
_0494
stress
KB with Piperine 10 mM
-0.8
-0.7
-0.4
-1.2
-0.2
stress
KB with Usnic Acid 10 mM
-0.7
+0.0
-0.5
-1.4
-0.0
stress
KB with Paclitaxel 10 mM
-0.6
-0.4
-0.4
-0.9
-0.2
stress
KB with Oxonitine 10 mM
-0.6
-0.4
-0.5
-0.8
-0.1
stress
KB with Escin 10 mM
-0.4
-0.2
-0.5
-1.6
+0.2
in planta
Green bean; epiphytic
-0.3
-0.4
-0.2
-1.5
+0.1
stress
KB with Avocadyne 10 mM
-0.5
-0.3
-0.1
-0.8
-0.4
in planta
epiphytic; Lima bean
-1.2
-0.5
+0.1
-1.0
+0.4
stress
KB with Oxedrine 10 mM
-0.5
-0.2
-0.3
-1.2
+0.1
kb
KB
-0.4
-0.4
-0.1
-1.1
-0.0
stress
KB with Nitrofurantoin 0.0625 mg/ml
-0.2
-0.5
-0.7
-0.6
+0.0
stress
KB with Dimethyl Sulfoxide 0.42 vol%
-0.3
-0.5
-0.4
-0.6
-0.1
stress
KB with Rotenone 0.25 mg/ml
-0.4
-0.3
-0.5
-0.8
+0.0
stress
KB with Avocatin A 10 mM
-0.4
-0.3
-0.1
-0.9
-0.1
stress
KB with Avocadene 10 mM
-0.4
-0.1
-0.5
-0.7
-0.1
stress
KB with Phloretin 125 ug/ml
-0.2
-0.1
-0.3
-0.8
-0.3
stress
KB with Rotenone 0.125 mg/ml
-0.3
+0.0
-0.5
-0.7
-0.3
stress
KB with Trimethoprim 15.6 ug/ml
-0.6
-0.5
-0.4
-0.3
+0.1
stress
KB with capsaicin 0.125 mg/ml
-0.2
-0.1
-0.6
-0.7
-0.2
stress
KB with capsaicin 0.25 mg/ml
-0.2
+0.1
-0.5
-0.9
-0.2
stress
KB with Strychnine Sulfate 10 mM
-0.4
+0.2
-0.7
-0.9
+0.2
stress
KB with Biochanin a diacetate 10 mM
-0.2
-0.5
-0.0
-0.8
+0.1
stress
KB with Tetracycline 0.0015 ug/ml
-0.1
-0.6
-0.4
-0.5
+0.1
stress
KB with Mitomycin C 0.05 ug/ml
-0.5
+0.2
-0.6
-0.5
-0.1
stress
KB with Isosafrole 10 mM
-0.3
-0.5
-0.6
-0.3
+0.3
stress
KB with Nitrofurantoin 31.25 ug/ml
-0.2
+0.3
-0.4
-0.8
+0.0
stress
KB with Harmol Hydrochloride 10 mM
-0.3
+0.2
-0.5
-0.5
+0.1
in planta
apoplastic, chopping recovery; Green bean
+0.4
+0.1
+0.4
+0.6
+0.4
in planta
apoplastic, chopping recovery; Green bean
+0.3
+0.3
+0.4
+0.5
+0.5
in planta
apoplastic, chopping recovery; Green bean
+0.1
+0.1
+0.4
+1.0
+0.5
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