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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_0451 and Psyr_0452 are separated by 122 nucleotides
Psyr_0452 and Psyr_0453 are separated by 106 nucleotides
Psyr_0453 and Psyr_0454 are separated by 131 nucleotides
Psyr_0454 and Psyr_0455 are separated by 209 nucleotides
Psyr_0451: Psyr_0451 - regulatory protein, LysR:LysR, substrate-binding protein, at 486,927 to 487,853
_0451
Psyr_0452: Psyr_0452 - HylII, at 487,976 to 488,590
_0452
Psyr_0453: Psyr_0453 - 16S rRNA m(3)U-1498 methyltransferase, at 488,697 to 489,416
_0453
Psyr_0454: Psyr_0454 - adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme, at 489,548 to 490,954
_0454
Psyr_0455: Psyr_0455 - Amine oxidase, at 491,164 to 493,038
_0455
Group
Condition
Psyr
_0451
Psyr
_0452
Psyr
_0453
Psyr
_0454
Psyr
_0455
stress
KB with Tetracycline 0.0015 ug/ml
-0.6
-0.1
-0.0
-2.9
-0.2
stress
KB with Berberine 15.6 ug/ml
-0.4
-0.0
-0.2
-2.3
-0.4
stress
KB with Avocatin A 10 mM
-0.1
-0.0
+0.1
-2.8
-0.3
stress
KB with Nalidixic 0.775 ug/ml
+0.1
-0.0
-0.2
-2.6
-0.4
stress
KB with Acriflavine 1.25 ug/ml
-0.3
-0.4
+0.1
-2.1
-0.4
stress
KB with Trimethoprim 15.6 ug/ml
-0.1
-0.0
-0.1
-2.7
-0.2
stress
KB with Ampicillin 0.775 ug/ml
-0.3
+0.2
-0.0
-2.5
-0.4
stress
KB with Paclitaxel 10 mM
+0.3
+0.0
+0.1
-2.9
-0.4
stress
KB with capsaicin 0.25 mg/ml
-0.3
-0.1
+0.1
-2.6
+0.0
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-0.1
+0.1
+0.1
-2.8
-0.0
stress
KB with Dimethyl Sulfoxide 0.42 vol%
-0.2
+0.1
-0.2
-2.4
+0.1
stress
KB with Rotenone 0.125 mg/ml
+0.1
-0.0
+0.1
-2.8
-0.1
stress
KB with Piperacillin 0.775 ug/ml
-0.1
+0.0
+0.1
-2.5
-0.2
stress
KB with Rifampicin 0.1 mg/ml
-0.2
-0.1
+0.2
-2.2
-0.3
stress
KB with Conessine 10 mM
+0.1
+0.1
+0.1
-2.5
-0.4
stress
KB with Methanol 5 vol%
-0.2
+0.2
+0.0
-2.5
-0.1
stress
KB with Oxedrine 10 mM
+0.2
-0.1
+0.2
-2.7
+0.1
stress
KB with Avocadyne 10 mM
+0.3
+0.1
-0.0
-2.2
-0.4
stress
KB with Prenyletin 10 mM
-0.0
-0.2
+0.4
-2.2
-0.2
stress
KB with Cotarnine Chloride 10 mM
-0.1
-0.0
+0.4
-2.1
-0.4
stress
KB with Gossypetin 10 mM
+0.2
-0.0
+0.3
-2.1
-0.5
stress
KB with Curcumin 10 mM
+0.1
+0.0
+0.3
-2.1
-0.3
stress
KB with Palmatine 10 mM
+0.3
-0.2
+0.6
-2.0
-0.6
stress
KB with Totarol 10 mM
+0.4
+0.1
+0.3
-2.3
-0.3
stress
KB with d-limonene 10 mM
+0.4
-0.2
+0.3
-2.1
-0.3
stress
KB with Solanesol 10 mM
+0.3
+0.1
+0.4
-2.3
-0.3
stress
KB with Auraptene 10 mM
+0.2
+0.2
+0.4
-2.2
-0.2
stress
KB with Escin 10 mM
+0.4
+0.0
+0.2
-2.2
+0.2
stress
KB with Acridine orange 3.125 ug/ml
+0.3
-0.1
+0.6
-1.7
-0.4
in planta
epiphytic; Lima bean
+0.8
-0.5
+0.5
-1.6
+0.1
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