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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_0437 and Psyr_0438 overlap by 26 nucleotides
Psyr_0438 and Psyr_0439 overlap by 25 nucleotides
Psyr_0439 and Psyr_0440 are separated by 309 nucleotides
Psyr_0440 and Psyr_0441 are separated by 692 nucleotides
Psyr_0437: Psyr_0437 - acyl carrier protein, putative, at 475,287 to 475,547
_0437
Psyr_0438: Psyr_0438 - Phospholipid/glycerol acyltransferase, at 475,522 to 476,334
_0438
Psyr_0439: Psyr_0439 - conserved hypothetical protein, at 476,310 to 477,029
_0439
Psyr_0440: Psyr_0440 - Cobyrinic acid a,c-diamide synthase, at 477,339 to 478,118
_0440
Psyr_0441: Psyr_0441 - conserved hypothetical protein, at 478,811 to 479,206
_0441
Group
Condition
Psyr
_0437
Psyr
_0438
Psyr
_0439
Psyr
_0440
Psyr
_0441
stress
KB with Gossypetin 10 mM
-1.1
-0.2
+0.3
-0.1
-0.4
in planta
apoplastic; Green bean; 6 days
-0.6
-0.4
+0.1
-0.1
-0.0
stress
KB with Avocatin A 10 mM
-0.7
+0.0
-0.1
-0.4
+0.1
stress
KB with Veratrine 10 mM
-1.2
-0.1
+0.4
+0.0
-0.1
stress
KB with Diallyl sulfide 10 mM
-0.5
-0.1
+0.4
-0.6
+0.1
in planta
epiphytic; Lima bean
-1.2
-0.3
+0.2
+0.2
+0.4
stress
KB with Levodopa 10 mM
-0.4
-0.3
+0.2
-0.1
+0.2
stress
KB with 4-hydroxychalcone 10 mM
+0.4
+0.1
-0.5
+0.0
-0.2
kb
KB
-0.3
-0.2
+0.4
+0.3
-0.2
kb
KB
+0.6
+0.2
-0.3
-0.1
-0.2
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-0.4
+0.1
+0.4
+0.4
-0.3
stress
KB with Avocadyne 10 mM
-0.6
-0.0
+0.6
+0.1
+0.1
stress
KB with Erythromycin 6.25 ug/ml
+0.4
-0.2
+0.3
-0.3
+0.1
in planta
epiphytic; Lima bean
+0.7
-0.4
+0.3
-0.3
-0.0
stress
KB with Piperacillin 0.775 ug/ml
+0.7
+0.1
-0.3
+0.1
-0.2
stress
KB with Conessine 10 mM
-0.3
+0.2
+0.4
+0.4
-0.1
stress
KB with d-limonene 10 mM
+0.6
+0.1
-0.3
+0.3
+0.0
stress
KB with D-Salicin 240 ug/ml
+0.5
-0.3
+0.3
+0.1
+0.1
stress
KB with Totarol 10 mM
-0.1
+0.3
+0.6
-0.0
-0.0
stress
KB with Ampicillin 0.775 ug/ml
+0.8
+0.0
-0.2
+0.2
-0.0
stress
KB with Chrysophanol 10 mM
-0.2
+0.3
+0.3
+0.2
+0.1
stress
KB with Harmine 10 mM
+0.9
-0.1
+0.4
-0.2
+0.2
stress
KB with Anethole 10 mM
+0.2
+0.2
+0.4
+0.1
+0.2
stress
KB with Tetracycline 0.0015 ug/ml
+0.4
+0.1
+0.4
+0.2
+0.2
stress
KB with Quercetin 360 ug/ml
+0.1
-0.1
+0.6
+0.5
+0.2
stress
KB with Methanol 5 vol%
+0.7
+0.1
+0.4
+0.2
+0.0
in planta
apoplastic, chopping recovery; Green bean
+0.3
+0.6
+0.5
+0.3
+0.2
in planta
apoplastic, chopping recovery; Green bean
+0.4
+0.4
+0.4
+0.4
+0.4
in planta
apoplastic, chopping recovery; Green bean
+0.7
+0.6
+0.3
+0.3
+0.2
in planta
apoplastic, chopping recovery; Green bean
+0.6
+0.6
+0.6
+0.2
+0.1
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