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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_0415 and Psyr_0416 are separated by 3 nucleotides
Psyr_0416 and Psyr_0417 are separated by 0 nucleotides
Psyr_0417 and Psyr_0418 are separated by 269 nucleotides
Psyr_0418 and Psyr_0419 overlap by 4 nucleotides
Psyr_0415: Psyr_0415 - N-acyl-D-amino-acid deacylase, at 453,090 to 454,565
_0415
Psyr_0416: Psyr_0416 - transcriptional regulator, RpiR family, at 454,569 to 455,429
_0416
Psyr_0417: Psyr_0417 - gluconate permease GntT, at 455,430 to 456,779
_0417
Psyr_0418: Psyr_0418 - conserved domain protein, at 457,049 to 457,696
_0418
Psyr_0419: Psyr_0419 - conserved hypothetical protein, at 457,693 to 458,958
_0419
Group
Condition
Psyr
_0415
Psyr
_0416
Psyr
_0417
Psyr
_0418
Psyr
_0419
in planta
apoplastic, chopping recovery; Green bean
-0.2
-0.5
-0.2
+0.0
-0.0
in planta
apoplastic, chopping recovery; Green bean
-0.0
-0.3
-0.3
-0.0
-0.2
stress
KB with Piperine 10 mM
+0.1
-0.2
-0.2
-0.1
-0.3
stress
KB with Benzalkonium chloride 1.55 ug/ml
-0.1
-0.3
-0.2
-0.2
-0.1
stress
KB with capsaicin 0.25 mg/ml
-0.3
-0.2
-0.2
-0.0
+0.1
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-0.3
-0.2
-0.1
-0.2
+0.1
stress
KB with Palmatine 10 mM
-0.2
+0.2
-0.5
+0.1
-0.1
stress
KB with Harmol 10 mM
+0.1
+0.1
-0.3
-0.1
-0.3
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-0.5
+0.1
-0.1
-0.1
-0.0
in planta
apoplastic, chopping recovery; Green bean
+0.2
-0.4
-0.2
+0.2
-0.3
stress
KB with capsaicin 0.125 mg/ml
-0.2
-0.2
-0.4
+0.0
+0.1
stress
KB with Veratrine 10 mM
-0.2
+0.3
-0.2
+0.0
-0.3
stress
KB with Diallyl sulfide 10 mM
+0.1
+0.2
-0.3
-0.3
-0.2
stress
KB with Nitrofurantoin 0.0625 mg/ml
-0.4
+0.2
-0.4
+0.1
+0.1
stress
KB with Lupeol 10 mM
-0.0
+0.3
-0.4
-0.1
-0.2
stress
KB with Carbenicillin 3.1 ug/ml
+0.2
+0.0
+0.1
-0.3
-0.3
stress
KB with Sinomenine 10 mM
+0.1
+0.2
-0.2
-0.1
-0.3
stress
KB with 4-acetoxyphenol 10 mM
-0.1
+0.4
-0.3
-0.1
-0.1
stress
KB with Erythromycin 6.25 ug/ml
-0.0
+0.4
+0.0
-0.2
-0.4
kb
KB
-0.3
+0.3
-0.1
-0.1
-0.1
stress
KB with Anabasine Hydrochloride 10 mM
-0.1
+0.3
+0.0
-0.1
-0.2
stress
KB with Harmine 10 mM
-0.0
+0.3
-0.2
-0.3
-0.0
stress
KB with Mitomycin C 0.05 ug/ml
-0.3
+0.5
-0.0
-0.2
-0.2
stress
KB with Acridine orange 3.125 ug/ml
-0.5
+0.5
-0.2
-0.0
+0.1
stress
KB with d-limonene 10 mM
-0.3
+0.4
-0.2
-0.0
+0.1
stress
KB with Biochanin a diacetate 10 mM
+0.1
+0.4
-0.2
+0.1
-0.1
stress
KB with Chaulmoogric 10 mM
+0.1
+0.4
-0.1
+0.1
+0.1
in planta
epiphytic; Lima bean
+0.2
+0.4
+0.1
-0.1
+0.0
stress
KB with Levodopa 10 mM
+0.1
+0.3
-0.1
+0.3
+0.2
in planta
epiphytic; Lima bean
+0.1
+0.3
+0.2
-0.2
+0.5
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