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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_0292 and Psyr_0293 are separated by 16 nucleotides
Psyr_0293 and Psyr_0294 overlap by 14 nucleotides
Psyr_0294 and Psyr_0295 are separated by 593 nucleotides
Psyr_0295 and Psyr_0296 overlap by 14 nucleotides
Psyr_0292: Psyr_0292 - porphobilinogen synthase, at 310,413 to 311,423
_0292
Psyr_0293: Psyr_0293 - Polyphosphate kinase, at 311,440 to 313,650
_0293
Psyr_0294: Psyr_0294 - Exopolyphosphatase, at 313,637 to 315,217
_0294
Psyr_0295: Psyr_0295 - amino acid ABC transporter ATP-binding protein, PAAT family, at 315,811 to 316,545
_0295
Psyr_0296: Psyr_0296 - amino acid ABC transporter membrane protein 2, PAAT family, at 316,532 to 317,179
_0296
Group
Condition
Psyr
_0292
Psyr
_0293
Psyr
_0294
Psyr
_0295
Psyr
_0296
in planta
epiphytic; Lima bean
N.D.
+0.1
-0.9
-3.1
+0.1
stress
KB with Acridine orange 3.125 ug/ml
N.D.
-1.7
-0.0
-1.3
+0.2
stress
KB with Acriflavine 1.25 ug/ml
N.D.
-3.4
+0.3
+0.2
+0.2
stress
KB with Harmine 10 mM
N.D.
-2.6
+0.1
+0.2
-0.1
stress
KB with Palmatine 10 mM
N.D.
-1.6
-0.0
+0.2
-0.1
stress
KB with Veratrine 10 mM
N.D.
-0.4
-0.7
-0.2
-0.1
stress
KB with Palmatine chloride 10 mM
N.D.
-1.2
-0.2
-0.1
+0.1
stress
KB with Erythromycin 6.25 ug/ml
N.D.
-0.8
-0.1
-0.5
+0.0
stress
KB with Berberine 15.6 ug/ml
N.D.
-1.0
-0.0
-0.1
-0.1
stress
KB with Harmol 10 mM
N.D.
-1.2
-0.1
+0.1
+0.0
stress
KB with Levodopa 10 mM
N.D.
-1.1
-0.5
+0.5
+0.1
stress
KB with Prenyletin 10 mM
N.D.
-0.5
-0.5
+0.1
-0.0
stress
KB with Harmol Hydrochloride 10 mM
N.D.
-1.4
+0.3
+0.1
+0.1
stress
KB with Carbenicillin 3.1 ug/ml
N.D.
-0.5
-0.4
-0.3
+0.4
in planta
epiphytic; Lima bean
N.D.
+0.1
-0.8
-0.1
+0.1
stress
KB with Solanesol 10 mM
N.D.
-0.4
-0.6
+0.2
+0.0
in planta
apoplastic; Green bean; 6 days
N.D.
-1.0
-0.0
+0.2
+0.0
stress
KB with Conessine 10 mM
N.D.
-0.7
-0.2
+0.2
+0.1
in planta
apoplastic; Green bean; 6 days
N.D.
-1.0
+0.2
+0.2
+0.1
stress
KB with Nalidixic 0.775 ug/ml
N.D.
+0.5
-0.7
-0.2
+0.1
in planta
Green bean; epiphytic
N.D.
+0.1
-0.8
+0.4
-0.0
stress
KB with Diallyl sulfide 10 mM
N.D.
-0.1
-0.8
+0.7
+0.0
stress
KB with Mitomycin C 0.05 ug/ml
N.D.
+1.0
-0.7
-0.4
-0.1
stress
KB with Chloramphenicol 1.55 ug/ml
N.D.
-0.7
+0.2
+0.4
+0.0
in planta
apoplastic, chopping recovery; Green bean
N.D.
-0.9
+0.4
+0.5
+0.0
stress
KB with Flavone 0.125 mg/ml
N.D.
-0.5
+0.2
+0.3
+0.1
in planta
apoplastic, chopping recovery; Green bean
N.D.
-1.0
+0.4
+0.7
-0.0
in planta
apoplastic, chopping recovery; Green bean
N.D.
-0.8
-0.0
+1.0
+0.3
in planta
apoplastic, chopping recovery; Green bean
N.D.
-0.9
+0.3
+0.8
+0.2
stress
KB with Novobiocin 7.75 ug/ml
N.D.
+0.6
-0.7
+0.4
+0.2
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