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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_0247 and Psyr_0248 are separated by 69 nucleotides
Psyr_0248 and Psyr_0249 are separated by 141 nucleotides
Psyr_0249 and Psyr_0250 are separated by 110 nucleotides
Psyr_0250 and Psyr_0251 are separated by 89 nucleotides
Psyr_0247: Psyr_0247 - glycine cleavage system H protein, at 260,791 to 261,177
_0247
Psyr_0248: Psyr_0248 - conserved hypothetical protein, at 261,247 to 261,567
_0248
Psyr_0249: Psyr_0249 - type II secretion system protein E:General secretory system II, protein E, N-terminal, at 261,709 to 263,493
_0249
Psyr_0250: Psyr_0250 - conserved hypothetical protein, at 263,604 to 263,987
_0250
Psyr_0251: Psyr_0251 - transcriptional regulator, AsnC family, at 264,077 to 264,547
_0251
Group
Condition
Psyr
_0247
Psyr
_0248
Psyr
_0249
Psyr
_0250
Psyr
_0251
in planta
epiphytic; Lima bean
+0.3
-1.9
+0.3
-0.5
+0.3
in planta
epiphytic; Lima bean
-0.2
-1.8
+0.1
+0.2
+0.3
in planta
apoplastic, chopping recovery; Green bean
+0.0
-0.5
-0.5
-0.3
+0.4
in planta
apoplastic, chopping recovery; Green bean
+0.4
-0.3
-0.5
-0.3
+0.4
in planta
apoplastic, chopping recovery; Green bean
+0.5
-0.6
-0.4
+0.1
+0.3
stress
KB with Harmine 10 mM
+0.4
-0.5
+0.0
-0.3
+0.3
in planta
apoplastic, chopping recovery; Green bean
+0.5
-0.1
-0.5
-0.3
+0.4
stress
KB with 4-hydroxychalcone 10 mM
+0.3
-0.7
+0.1
+0.5
-0.0
in planta
apoplastic; Green bean; 6 days
+0.1
+0.8
-0.0
-0.5
+0.0
stress
KB with Mitomycin C 0.05 ug/ml
+0.7
-0.3
+0.2
-0.1
+0.1
stress
KB with Harmol 10 mM
+0.5
-0.6
+0.3
+0.3
+0.1
stress
KB with Trimethoprim 15.6 ug/ml
+0.4
+0.5
+0.1
-0.2
-0.2
stress
KB with Carbenicillin 3.1 ug/ml
+0.6
+0.6
-0.1
-0.8
+0.3
stress
KB with Paclitaxel 10 mM
+0.8
-0.4
+0.2
+0.1
-0.1
kb
KB
+0.3
-0.5
+0.2
+1.0
-0.3
stress
KB with Lawsone 10 mM
+0.3
+0.2
+0.3
+0.3
-0.4
stress
KB with Usnic Acid 10 mM
+0.1
+0.7
+0.1
+0.2
-0.3
stress
KB with Veratrine 10 mM
-0.1
+0.1
+0.3
+0.8
-0.1
stress
KB with Methanol 5 vol%
+0.6
+0.1
+0.1
+0.5
-0.3
stress
KB with Auraptene 10 mM
+0.4
-0.1
+0.2
+0.6
+0.0
stress
KB with Chrysophanol 10 mM
+0.2
+0.0
+0.2
+0.7
-0.1
stress
KB with 4-acetoxyphenol 10 mM
+0.3
+0.2
+0.3
+0.5
-0.2
stress
KB with Conessine 10 mM
+0.5
+0.0
+0.3
+0.7
-0.2
kb
KB
+0.5
+0.3
+0.2
+0.5
-0.0
stress
KB with Chaulmoogric 10 mM
+0.5
+0.3
+0.2
+0.4
+0.1
stress
KB with Sinomenine 10 mM
+0.4
+0.9
+0.1
+0.0
+0.2
stress
KB with Totarol 10 mM
+0.2
+0.5
+0.3
+0.2
+0.4
stress
KB with Solanesol 10 mM
+0.5
+0.6
+0.2
+0.7
-0.2
stress
KB with Gossypetin 10 mM
+0.8
+0.3
+0.3
+0.7
-0.2
stress
KB with Piperine 10 mM
+0.5
+0.5
+0.2
+0.7
+0.4
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