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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_0139 and Psyr_0140 are separated by 1 nucleotides
Psyr_0140 and Psyr_0141 overlap by 1 nucleotides
Psyr_0141 and Psyr_0142 are separated by 1 nucleotides
Psyr_0142 and Psyr_0143 are separated by 9 nucleotides
Psyr_0139: Psyr_0139 - extracellular solute-binding protein, family 5, at 149,457 to 151,340
_0139
Psyr_0140: Psyr_0140 - Binding-protein-dependent transport systems inner membrane component, at 151,342 to 152,409
_0140
Psyr_0141: Psyr_0141 - Binding-protein-dependent transport systems inner membrane component, at 152,409 to 153,431
_0141
Psyr_0142: Psyr_0142 - ABC transporter, at 153,433 to 155,016
_0142
Psyr_0143: Psyr_0143 - chemotaxis sensory transducer, at 155,026 to 156,546
_0143
Group
Condition
Psyr
_0139
Psyr
_0140
Psyr
_0141
Psyr
_0142
Psyr
_0143
in planta
epiphytic; Lima bean
-0.3
-0.0
-0.3
-0.9
-0.2
stress
KB with Sclareolide 10 mM
-0.0
+0.1
-0.3
-0.8
-0.3
stress
KB with Lawsone 10 mM
-0.0
-0.2
-0.2
-0.2
-0.3
stress
KB with Escin 10 mM
+0.0
-0.3
-0.1
-0.3
+0.0
stress
KB with Avocatin A 10 mM
-0.1
+0.1
-0.2
-0.2
-0.2
in planta
epiphytic; Lima bean
-0.3
-0.1
+0.1
-0.1
-0.3
stress
KB with Paclitaxel 10 mM
-0.2
+0.1
-0.2
-0.2
-0.1
stress
KB with Palmatine 10 mM
-0.0
+0.1
-0.3
-0.3
-0.0
stress
KB with Rotenone 0.25 mg/ml
+0.1
-0.1
-0.2
-0.4
+0.1
stress
KB with capsaicin 0.125 mg/ml
+0.2
-0.2
-0.1
-0.4
+0.2
stress
KB with Chloramphenicol 1.55 ug/ml
-0.0
+0.2
-0.0
-0.3
-0.1
stress
KB with Avocadyne 10 mM
-0.0
+0.2
-0.1
-0.2
-0.2
stress
KB with Rotenone 0.125 mg/ml
+0.2
-0.3
+0.0
-0.3
+0.1
stress
KB with 4-acetoxyphenol 10 mM
-0.1
-0.1
-0.1
+0.3
-0.2
in planta
apoplastic; Green bean; 6 days
-0.0
+0.2
+0.0
-0.4
-0.0
stress
KB with Cotarnine Chloride 10 mM
+0.1
-0.3
+0.1
+0.1
-0.1
kb
KB
+0.0
+0.1
-0.2
+0.3
-0.1
in planta
apoplastic, chopping recovery; Green bean
+0.2
+0.3
+0.1
-0.4
+0.1
stress
KB with L-alliin 10 mM
+0.0
+0.2
-0.2
+0.3
-0.1
stress
KB with Emodin 10 mM
-0.1
+0.1
-0.2
+0.5
-0.1
stress
KB with Solanesol 10 mM
-0.1
+0.2
-0.1
+0.4
-0.0
stress
KB with Veratrine 10 mM
-0.1
+0.2
-0.2
+0.5
-0.1
stress
KB with Auraptene 10 mM
+0.0
+0.1
-0.1
+0.5
-0.1
in planta
apoplastic, chopping recovery; Green bean
+0.2
+0.3
+0.0
-0.1
+0.1
stress
KB with D-Salicin 240 ug/ml
-0.1
+0.1
-0.1
+0.4
+0.2
in planta
Green bean; epiphytic
+0.2
-0.1
+0.2
+0.3
-0.0
stress
KB with Mitomycin C 0.05 ug/ml
+0.1
-0.0
-0.1
+0.5
+0.0
in planta
Green bean; epiphytic
+0.2
-0.1
+0.3
+0.3
-0.1
in planta
apoplastic, chopping recovery; Green bean
+0.2
+0.5
-0.0
-0.0
+0.1
in planta
apoplastic, chopping recovery; Green bean
+0.3
+0.4
+0.2
+0.0
+0.2
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