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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_0129 and Psyr_0130 are separated by 127 nucleotides
Psyr_0130 and Psyr_0131 are separated by 595 nucleotides
Psyr_0131 and Psyr_0132 are separated by 100 nucleotides
Psyr_0132 and Psyr_0133 are separated by 83 nucleotides
Psyr_0129: Psyr_0129 - conserved hypothetical protein, at 137,656 to 137,955
_0129
Psyr_0130: Psyr_0130 - hypothetical protein, at 138,083 to 138,991
_0130
Psyr_0131: Psyr_0131 - HAD-superfamily hydrolase, subfamily IA, variant 3:HAD-superfamily hydrolase, subfamily IA, variant 1, at 139,587 to 140,261
_0131
Psyr_0132: Psyr_0132 - conserved hypothetical protein, at 140,362 to 140,610
_0132
Psyr_0133: Psyr_0133 - transcriptional regulator, AsnC family, at 140,694 to 141,164
_0133
Group
Condition
Psyr
_0129
Psyr
_0130
Psyr
_0131
Psyr
_0132
Psyr
_0133
stress
KB with Mitomycin C 0.05 ug/ml
-0.1
-0.2
-0.3
-0.2
-0.3
in planta
epiphytic; Lima bean
+0.0
-0.4
-0.8
-0.0
+0.2
stress
KB with Carbenicillin 3.1 ug/ml
+0.3
-0.2
-0.7
-0.0
+0.1
stress
KB with Helenine 10 mM
-0.2
-0.0
-0.3
+0.2
-0.3
stress
KB with Lupeol 10 mM
-0.3
-0.2
+0.0
-0.3
+0.2
in planta
apoplastic, chopping recovery; Green bean
-0.2
+0.1
+0.2
+0.1
-0.6
stress
KB with Lawsone 10 mM
-0.3
-0.1
-0.3
+0.4
-0.1
stress
KB with Auraptene 10 mM
-0.4
-0.2
-0.1
+0.2
+0.2
stress
KB with Acriflavine 1.25 ug/ml
+0.2
-0.2
-0.2
+0.2
-0.2
stress
KB with Chaulmoogric 10 mM
-0.1
-0.0
-0.5
+0.4
+0.0
in planta
epiphytic; Lima bean
+0.1
-0.1
-0.8
+0.1
+0.5
stress
KB with Conessine 10 mM
-0.2
-0.3
+0.3
+0.2
-0.1
in planta
apoplastic; Green bean; 6 days
-0.1
-0.1
+0.5
-0.2
-0.2
stress
KB with Physcion 10 mM
-0.1
-0.1
-0.4
+0.4
+0.2
stress
KB with Totarol 10 mM
-0.1
-0.1
+0.1
+0.4
-0.4
stress
KB with Terpene 10 mM
+0.0
-0.2
-0.4
+0.4
+0.1
stress
KB with Levodopa 10 mM
-0.1
-0.3
-0.3
+0.4
+0.3
stress
KB with d-limonene 10 mM
-0.1
-0.0
-0.4
+0.5
-0.1
stress
KB with 4-hydroxychalcone 10 mM
+0.1
-0.2
-0.4
+0.3
+0.2
stress
KB with Tetracycline 0.0015 ug/ml
-0.4
+0.1
+0.1
+0.5
-0.1
stress
KB with Emodin 10 mM
-0.3
-0.1
+0.0
+0.4
+0.3
stress
KB with Biochanin a diacetate 10 mM
-0.0
-0.1
-0.2
+0.4
+0.3
stress
KB with Hydrastine (1R, 9S) 10 mM
+0.2
-0.3
-0.4
+0.6
+0.3
stress
KB with Dimethyl Sulfoxide 0.42 vol%
-0.1
-0.1
+0.3
+0.5
-0.2
stress
KB with Berberine 15.6 ug/ml
+0.2
-0.1
-0.1
+0.4
+0.2
stress
KB with Palmatine chloride 10 mM
+0.3
-0.1
-0.2
+0.4
+0.2
stress
KB with Nonanoic 10 mM
-0.2
-0.0
+0.3
+0.5
+0.1
stress
KB with Quercetin 360 ug/ml
+0.2
-0.2
+0.4
+0.0
+0.3
in planta
apoplastic; Green bean; 6 days
-0.0
-0.0
+0.9
-0.1
-0.0
stress
KB with Harmol 10 mM
-0.1
-0.0
+0.0
+0.4
+0.4
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