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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_0125 and Psyr_0126 are separated by 16 nucleotides
Psyr_0126 and Psyr_0127 are separated by 83 nucleotides
Psyr_0127 and Psyr_0128 are separated by 229 nucleotides
Psyr_0128 and Psyr_0129 are separated by 129 nucleotides
Psyr_0125: Psyr_0125 - conserved hypothetical protein, at 135,597 to 135,953
_0125
Psyr_0126: Psyr_0126 - Protein of unknown function DUF805, at 135,970 to 136,410
_0126
Psyr_0127: Psyr_0127 - Glutathione-dependent formaldehyde-activating, GFA, at 136,494 to 136,931
_0127
Psyr_0128: Psyr_0128 - H-NS family protein MvaT, at 137,161 to 137,526
_0128
Psyr_0129: Psyr_0129 - conserved hypothetical protein, at 137,656 to 137,955
_0129
Group
Condition
Psyr
_0125
Psyr
_0126
Psyr
_0127
Psyr
_0128
Psyr
_0129
stress
KB with Sclareolide 10 mM
-1.1
+0.1
+0.1
-0.1
-0.2
stress
KB with Lupeol 10 mM
-0.4
-0.2
+0.0
-0.2
-0.3
stress
KB with Emodin 10 mM
-0.6
-0.0
+0.1
-0.1
-0.3
stress
KB with Auraptene 10 mM
-0.0
+0.0
-0.0
-0.5
-0.4
stress
KB with Veratrine 10 mM
-0.7
+0.2
-0.0
-0.1
-0.1
stress
KB with Terpene 10 mM
-0.6
-0.2
+0.1
+0.1
+0.0
stress
KB with 4-acetoxyphenol 10 mM
-0.5
+0.0
+0.2
-0.3
+0.1
stress
KB with Palmatine chloride 10 mM
-0.4
-0.1
+0.1
-0.3
+0.3
stress
KB with Lawsone 10 mM
-0.5
-0.0
+0.1
+0.2
-0.3
stress
KB with Chrysophanol 10 mM
-0.6
+0.2
+0.1
-0.0
-0.0
stress
KB with Curcumin 10 mM
-0.7
+0.4
+0.0
-0.0
-0.0
in planta
epiphytic; Lima bean
-0.4
-0.1
-0.0
+0.3
+0.1
kb
KB
+0.4
-0.4
+0.1
-0.1
+0.1
stress
KB with Ampicillin 0.775 ug/ml
+0.2
-0.3
-0.0
+0.3
-0.0
stress
KB with Rotenone 0.125 mg/ml
+0.4
-0.1
-0.0
+0.1
-0.2
stress
KB with Cantharidin 10 mM
+0.3
+0.1
+0.1
-0.1
+0.2
stress
KB with Harmine 10 mM
+0.7
+0.1
+0.2
-0.3
-0.2
stress
KB with Acridine orange 3.125 ug/ml
+0.4
+0.0
+0.1
+0.3
-0.1
stress
KB with Novobiocin 7.75 ug/ml
+0.4
+0.2
+0.2
-0.1
-0.0
stress
KB with Harmol Hydrochloride 10 mM
+0.4
-0.0
+0.1
+0.2
+0.1
stress
KB with Berberine 15.6 ug/ml
+0.5
+0.1
+0.1
-0.1
+0.2
stress
KB with capsaicin 0.25 mg/ml
+0.8
-0.2
+0.1
+0.0
+0.1
stress
KB with Oxonitine 10 mM
+0.3
+0.3
+0.1
+0.1
+0.1
stress
KB with Acriflavine 1.25 ug/ml
+0.4
+0.1
+0.3
-0.1
+0.2
stress
KB with Isosafrole 10 mM
+0.3
+0.2
+0.1
+0.2
+0.2
stress
KB with Gamma-Aminobutyric Acid Hydrochloride 10 mM
+0.5
+0.2
+0.1
+0.2
-0.0
in planta
epiphytic; Lima bean
+0.5
+0.4
+0.0
+0.3
+0.0
stress
KB with Cotarnine Chloride 10 mM
+0.6
+0.3
+0.1
+0.2
+0.3
stress
KB with Mitomycin C 0.05 ug/ml
+0.9
+0.4
+0.0
+0.1
-0.1
stress
KB with Carbenicillin 3.1 ug/ml
+0.9
+0.2
-0.0
+0.4
+0.3
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