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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_0088 and Psyr_0089 are separated by 750 nucleotides
Psyr_0089 and Psyr_0090 are separated by 156 nucleotides
Psyr_0090 and Psyr_0091 are separated by 179 nucleotides
Psyr_0091 and Psyr_0092 are separated by 286 nucleotides
Psyr_0088: Psyr_0088 - PAS:GGDEF, at 95,185 to 96,192
_0088
Psyr_0089: Psyr_0089 - Response regulator receiver, at 96,943 to 98,331
_0089
Psyr_0090: Psyr_0090 - 4-aminobutyrate aminotransferase apoenzyme, at 98,488 to 99,768
_0090
Psyr_0091: Psyr_0091 - succinate semialdehyde dehydrogenase, at 99,948 to 101,390
_0091
Psyr_0092: Psyr_0092 - Lysine exporter protein (LYSE/YGGA), at 101,677 to 102,312
_0092
Group
Condition
Psyr
_0088
Psyr
_0089
Psyr
_0090
Psyr
_0091
Psyr
_0092
stress
KB with Harmol 10 mM
-0.2
-0.1
-0.2
-0.1
-0.1
stress
KB with Ampicillin 0.775 ug/ml
+0.1
-0.1
-0.2
-0.1
-0.2
in planta
epiphytic; Lima bean
+0.1
+0.1
-0.2
-0.2
-0.4
stress
KB with capsaicin 0.125 mg/ml
-0.2
-0.2
-0.1
-0.1
+0.1
stress
KB with D-Salicin 240 ug/ml
-0.3
-0.2
-0.1
+0.1
+0.0
in planta
apoplastic, chopping recovery; Green bean
-0.3
-0.1
-0.2
+0.0
+0.2
in planta
apoplastic, chopping recovery; Green bean
-0.3
-0.2
-0.2
-0.1
+0.4
stress
KB with capsaicin 0.25 mg/ml
-0.1
-0.1
+0.0
+0.2
-0.2
in planta
apoplastic, chopping recovery; Green bean
-0.1
-0.2
-0.1
-0.2
+0.4
stress
KB with Solanesol 10 mM
-0.2
+0.1
+0.1
-0.0
-0.1
in planta
apoplastic, chopping recovery; Green bean
-0.3
-0.1
-0.2
-0.0
+0.6
stress
KB with Usnic Acid 10 mM
-0.1
-0.0
+0.2
+0.2
-0.2
stress
KB with Piperic 10 mM
-0.2
+0.1
+0.2
+0.2
-0.2
stress
KB with Acriflavine 1.25 ug/ml
+0.2
+0.0
+0.1
+0.1
-0.2
stress
KB with Terpene 10 mM
-0.1
-0.0
+0.3
+0.2
-0.1
stress
KB with Auraptene 10 mM
-0.2
-0.1
+0.0
+0.3
+0.2
stress
KB with Avocadene 10 mM
-0.1
+0.1
+0.1
+0.3
-0.2
stress
KB with Lawsone 10 mM
-0.1
-0.0
+0.1
+0.2
+0.2
stress
KB with Methyl-2-Hydroxy-Phenylproprionate 10 mM
-0.1
+0.1
+0.1
+0.4
-0.1
stress
KB with Acridine orange 3.125 ug/ml
+0.5
+0.0
-0.2
+0.2
-0.1
stress
KB with Piperine 10 mM
+0.3
+0.0
+0.0
+0.2
-0.2
stress
KB with Carbenicillin 3.1 ug/ml
+0.4
+0.1
+0.2
+0.2
-0.4
stress
KB with Harmine 10 mM
+0.2
+0.2
-0.1
+0.1
+0.1
stress
KB with Chrysophanol 10 mM
-0.1
+0.2
+0.3
+0.0
+0.1
stress
KB with Palmatine 10 mM
+0.2
+0.1
+0.2
+0.3
-0.2
stress
KB with Gossypol-Acetic Acid Complex 10 mM
+0.1
+0.2
+0.1
+0.2
+0.1
stress
KB with Palmatine chloride 10 mM
+0.0
+0.1
+0.2
+0.3
-0.0
in planta
apoplastic; Green bean; 6 days
+0.1
-0.0
+0.3
+0.1
+0.2
stress
KB with Mitomycin C 0.05 ug/ml
+0.4
+0.3
+0.2
+0.2
-0.2
in planta
epiphytic; Lima bean
+0.1
+0.3
+0.2
+0.0
+0.5
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