Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_988 and PfGW456L13_989 are separated by 3 nucleotidesPfGW456L13_989 and PfGW456L13_990 are separated by 50 nucleotidesPfGW456L13_990 and PfGW456L13_991 overlap by 1 nucleotidesPfGW456L13_991 and PfGW456L13_992 overlap by 8 nucleotides PfGW456L13_988 - FIG229276: Transcriptional regulator, AraC family, at 1,103,221 to 1,104,060 _988 PfGW456L13_989 - Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase, at 1,104,064 to 1,105,068 _989 PfGW456L13_990 - Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-), at 1,105,119 to 1,105,730 _990 PfGW456L13_991 - FIG015287: Zinc protease, at 1,105,730 to 1,107,220 _991 PfGW456L13_992 - FIG015547: peptidase, M16 family, at 1,107,213 to 1,108,568 _992
Group Condition PfGW456L13_988 PfGW456L13_989 PfGW456L13_990 PfGW456L13_991 PfGW456L13_992
carbon source Trisodium citrate (C) -1.4 -0.4 -6.0 -0.5 -0.3
carbon source octanoate (C) -0.0 -0.1 -2.7 -0.9 -1.9
carbon source D-Serine (C) -0.3 +0.1 -3.3 -0.6 -0.5
stress Lomefloxacin 0.0004 mM -0.0 -0.1 -2.0 -0.9 -1.1
stress nitrate 200 mM -0.0 -0.0 -2.3 -0.5 -0.8
carbon source Putrescine (C) -0.3 +0.2 -3.2 -0.0 -0.1
carbon source L-Arabinose (C) +0.3 -0.1 -3.4 +0.1 -0.1
carbon source L-Phenylalanine (C) -0.1 +0.0 -2.7 -0.1 -0.3
carbon source D-Gluconic Acid (C) -0.7 +0.0 -1.1 -0.3 -1.0
carbon source L-Arabinose (C) +0.0 +0.0 -2.4 -0.1 -0.6
carbon source L-Tryptophan (C) -0.2 +0.0 -2.5 +0.0 -0.2
carbon source L-Phenylalanine (C) -0.1 -0.0 -2.1 -0.1 -0.5
carbon source L-Asparagine (C) -0.4 +0.0 -1.9 -0.1 -0.4
carbon source D-Alanine (C) -0.1 -0.0 -1.9 -0.3 -0.4
carbon source L-Alanine (C) -0.5 +0.3 -1.6 -0.4 -0.4
stress Fusidic 0.03 mg/ml -0.3 -0.2 -1.7 -0.1 -0.3
carbon source D-Serine (C) -0.4 +0.1 -1.8 -0.1 -0.2
nitrogen source L-Threonine (N) -0.4 -0.1 -1.6 -0.1 -0.3
carbon source D-Fructose (C) -0.6 +0.1 -1.9 +0.1 -0.2
carbon source L-Glutamine (C) -0.6 -0.3 -1.6 -0.1 +0.1
carbon source D-Glucosamine Hydrochloride (C) +0.0 +0.0 -2.2 -0.1 -0.1
carbon source L-Malic (C) -1.0 -0.0 -0.7 -0.4 -0.3
stress Chloride 400 mM +0.1 +0.0 -1.6 -0.3 -0.5
carbon source D-Fructose (C) -0.4 +0.3 -1.4 +0.0 -0.7
carbon source L-Valine (C) +0.2 -0.1 -1.9 -0.1 -0.3
carbon source D-Alanine (C) -0.2 +0.1 -1.3 -0.5 -0.5
carbon source L-Histidine (C) -0.4 +0.2 -1.7 -0.1 -0.2
carbon source L-Malic (C) +0.2 +0.1 -1.5 -0.4 -0.3
carbon source D-Gluconic Acid (C) +0.6 -0.1 -1.2 -0.6 -0.5
carbon source D-Galactose (C) -0.3 +0.1 -1.4 -0.2 +0.3
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