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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_961 and PfGW456L13_962 overlap by 1 nucleotides
PfGW456L13_962 and PfGW456L13_963 are separated by 38 nucleotides
PfGW456L13_963 and PfGW456L13_964 are separated by 117 nucleotides
PfGW456L13_964 and PfGW456L13_965 overlap by 1 nucleotides
PfGW456L13_961 - Ferric iron ABC transporter, ATP-binding protein, at 1,075,625 to 1,076,701
_961
PfGW456L13_962 - Ferric iron ABC transporter, permease protein, at 1,076,701 to 1,078,425
_962
PfGW456L13_963 - Ferric iron ABC transporter, iron-binding protein, at 1,078,464 to 1,079,489
_963
PfGW456L13_964 - FIG00350678: hypothetical protein, at 1,079,607 to 1,080,740
_964
PfGW456L13_965 - FIG00954147: hypothetical protein, at 1,080,740 to 1,081,303
_965
Group
Condition
PfGW456L13
_961
PfGW456L13
_962
PfGW456L13
_963
PfGW456L13
_964
PfGW456L13
_965
carbon source
a-Ketoglutaric (C)
-0.1
+0.1
-0.2
+0.0
-1.1
carbon source
L-Arabinose (C)
+0.0
-0.1
+0.1
-0.1
-1.2
carbon source
L-Malic (C)
-0.4
+0.0
+0.1
-0.3
-0.3
carbon source
Glycerol (C)
+0.4
+0.1
-0.0
+0.0
-0.8
carbon source
a-Ketoglutaric (C)
-0.3
-0.3
-0.0
-0.2
+0.4
carbon source
L-Valine (C)
-0.3
-0.2
+0.2
-0.3
+0.3
nitrogen source
Gly-Glu (N)
+0.1
+0.3
+0.0
-0.1
-0.5
carbon source
L-Arabinose (C)
+0.2
-0.1
-0.2
-0.2
+0.2
nitrogen source
NAG (N)
+0.2
-0.2
+0.1
+0.2
-0.3
carbon source
D-Galactose (C)
+0.2
+0.2
+0.0
-0.2
-0.2
carbon source
D,L-Lactate (C)
-0.1
+0.3
-0.2
-0.2
+0.2
carbon source
Putrescine (C)
-0.4
+0.1
-0.1
-0.2
+0.7
carbon source
Trisodium citrate (C)
-0.3
+0.2
-0.2
-0.2
+0.5
carbon source
L-Tryptophan (C)
+0.2
-0.3
+0.2
-0.1
+0.1
carbon source
D-Galactose (C)
+0.1
-0.2
-0.0
-0.3
+0.5
carbon source
D-Glucose (C)
+0.2
-0.5
+0.1
+0.1
+0.3
carbon source
D-Fructose (C)
-0.1
-0.1
+0.1
-0.1
+0.6
carbon source
D-Gluconic Acid (C)
+0.3
-0.2
-0.1
+0.0
+0.4
stress
Dimethyl Sulfoxide 7.5 vol%
-0.0
-0.1
-0.1
+0.3
+0.4
stress
Fusidic 0.03 mg/ml
+0.2
+0.1
-0.1
-0.1
+0.5
carbon source
D-Glucosamine Hydrochloride (C)
+0.2
+0.0
-0.0
-0.2
+0.6
carbon source
D-Fructose (C)
-0.0
+0.1
+0.2
-0.1
+0.5
carbon source
D-Lactate (C)
+0.2
+0.1
-0.1
-0.2
+0.8
stress
Lomefloxacin 0.0004 mM
+0.2
-0.2
+0.0
+0.2
+0.5
stress
Chloride 400 mM
+0.5
-0.0
-0.1
+0.1
+0.3
carbon source
octanoate (C)
+0.1
+0.0
+0.1
+0.2
+0.4
stress
Bacitracin 0.5 mg/ml
+0.1
+0.1
-0.1
+0.2
+0.6
carbon source
succinate (C)
-0.1
+0.3
-0.0
+0.1
+0.7
stress
nitrite 10 mM
+0.3
+0.1
-0.0
+0.1
+0.5
stress
Aluminum chloride 5 mM
+0.4
+0.1
+0.0
+0.3
+0.3
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