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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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500 nt
PfGW456L13_94 and PfGW456L13_95 are separated by 27 nucleotides
PfGW456L13_95 and PfGW456L13_96 are separated by 283 nucleotides
PfGW456L13_96 and PfGW456L13_97 are separated by 124 nucleotides
PfGW456L13_97 and PfGW456L13_98 are separated by 249 nucleotides
PfGW456L13_94 - Chaperone-modulator protein CbpM, at 109,582 to 109,887
_94
PfGW456L13_95 - DnaJ-class molecular chaperone CbpA, at 109,915 to 110,877
_95
PfGW456L13_96 - Putative heat shock protein YegD, at 111,161 to 112,435
_96
PfGW456L13_97 - membrane protein, putative, at 112,560 to 113,573
_97
PfGW456L13_98 - Phosphate starvation-inducible protein psiF precursor, at 113,823 to 114,131
_98
Group
Condition
PfGW456L13
_94
PfGW456L13
_95
PfGW456L13
_96
PfGW456L13
_97
PfGW456L13
_98
stress
A22 0.04 mg/ml
-0.1
-0.0
-0.0
-2.0
N.D.
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
-0.4
-0.2
-0.4
-0.4
N.D.
carbon source
D-Gluconic Acid (C)
-0.1
-1.2
-0.1
+0.2
N.D.
carbon source
D-Alanine (C)
-0.3
-0.3
-0.1
-0.5
N.D.
stress
Vancomycin 0.25 mg/ml
-0.3
-0.3
+0.0
-0.4
N.D.
stress
Dimethyl Sulfoxide 7.5 vol%
-0.1
-0.1
+0.0
-0.8
N.D.
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
+0.2
-0.6
-0.0
-0.5
N.D.
carbon source
D-Fructose (C)
-0.8
+0.2
+0.1
-0.4
N.D.
carbon source
L-Tryptophan (C)
-0.5
-0.1
-0.3
+0.1
N.D.
carbon source
succinate (C)
-0.3
-0.3
+0.4
-0.4
N.D.
carbon source
D-Fructose (C)
-0.2
-0.9
+0.5
-0.1
N.D.
carbon source
L-Lactate (C)
+0.2
+0.2
-0.6
-0.3
N.D.
carbon source
L-Tryptophan (C)
+0.1
-0.6
-0.3
+0.6
N.D.
carbon source
D-Lactate (C)
-0.8
+0.2
+0.3
+0.2
N.D.
carbon source
L-Valine (C)
+0.4
-0.4
-0.0
+0.2
N.D.
carbon source
L-Histidine (C)
+0.1
-0.4
+0.1
+0.6
N.D.
carbon source
D-Serine (C)
-0.3
-0.1
+0.1
+0.8
N.D.
carbon source
L-Malic (C)
+0.5
+0.1
-0.5
+0.5
N.D.
carbon source
D-Gluconic Acid (C)
+0.2
-0.4
+0.1
+0.7
N.D.
carbon source
D-Glucose (C)
-0.1
+0.2
-0.1
+0.6
N.D.
carbon source
D-Galactose (C)
+0.6
+0.4
-0.1
-0.2
N.D.
nitrogen source
D-Alanine (N)
+0.3
+0.4
+0.2
-0.2
N.D.
carbon source
D-Glucosamine Hydrochloride (C)
-0.5
+0.1
+0.2
+1.0
N.D.
nitrogen source
L-Histidine (N)
+0.4
+0.2
+0.4
-0.1
N.D.
nitrogen source
Gly-DL-Asp (N)
+0.8
-0.2
+0.2
+0.1
N.D.
nitrogen source
D-Serine (N)
+0.2
-0.0
+0.2
+0.8
N.D.
carbon source
Trisodium citrate (C)
+0.5
+0.5
+0.2
-0.1
N.D.
carbon source
a-Ketoglutaric (C)
+0.3
+0.3
+0.2
+0.4
N.D.
stress
Lomefloxacin 0.0004 mM
-0.1
+0.3
+0.4
+0.7
N.D.
carbon source
octanoate (C)
-0.2
+0.3
-0.3
+5.8
N.D.
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