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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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500 nt
PfGW456L13_941 and PfGW456L13_942 are separated by 135 nucleotides
PfGW456L13_942 and PfGW456L13_943 are separated by 61 nucleotides
PfGW456L13_943 and PfGW456L13_944 are separated by 182 nucleotides
PfGW456L13_944 and PfGW456L13_945 are separated by 38 nucleotides
PfGW456L13_941 - ABC-type amino acid transport/signal transduction systems, periplasmic component/domain, at 1,054,207 to 1,054,791
_941
PfGW456L13_942 - ATPases of the AAA+ class, at 1,054,927 to 1,055,349
_942
PfGW456L13_943 - D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95), at 1,055,411 to 1,056,640
_943
PfGW456L13_944 - D-2-hydroxyglutarate dehydrogenase, at 1,056,823 to 1,058,241
_944
PfGW456L13_945 - Fumarylacetoacetate hydrolase family protein, at 1,058,280 to 1,058,945
_945
Group
Condition
PfGW456L13
_941
PfGW456L13
_942
PfGW456L13
_943
PfGW456L13
_944
PfGW456L13
_945
carbon source
D-Fructose (C)
-0.0
-1.1
-4.2
-1.5
-0.4
carbon source
D-Fructose (C)
-0.3
-0.4
-5.0
-1.3
+0.1
carbon source
L-Phenylalanine (C)
-0.1
+0.2
-3.9
-2.6
+0.0
carbon source
Trisodium citrate (C)
-0.2
-0.6
-4.6
-0.9
-0.0
carbon source
D-Lactate (C)
+0.2
-0.9
-4.4
-0.9
-0.1
carbon source
a-Ketoglutaric (C)
+0.3
-2.0
-4.0
-0.5
+0.3
carbon source
L-Valine (C)
+0.1
+0.1
-4.3
-1.7
+0.0
carbon source
L-Phenylalanine (C)
-0.0
+0.3
-3.7
-2.3
-0.1
carbon source
L-Valine (C)
+0.0
-0.4
-3.8
-1.6
-0.0
carbon source
Tween 20 (C)
+0.1
+0.4
-3.7
-2.9
+0.5
carbon source
D-Mannose (C)
-0.3
+0.2
-3.4
-2.3
+0.1
carbon source
L-Tryptophan (C)
-0.2
-0.2
-4.4
-1.0
+0.2
carbon source
D-Gluconic Acid (C)
-0.4
-0.5
-2.9
-0.7
-1.0
carbon source
L-Alanine (C)
+0.1
-1.0
-3.6
-0.9
+0.0
carbon source
Glycerol (C)
+0.1
-0.8
-3.8
-0.9
-0.0
carbon source
D-Mannose (C)
+0.0
-0.4
-3.7
-1.7
+0.6
carbon source
L-Tryptophan (C)
-0.1
+0.3
-4.5
-1.1
+0.4
carbon source
L-Arabinose (C)
-0.0
-0.1
-4.3
-1.1
+0.6
nitrogen source
L-Lysine (N)
-0.3
-0.0
-3.8
-1.1
+0.3
nitrogen source
L-Leucine (N)
+0.1
+0.4
-4.7
-0.7
+0.1
carbon source
octanoate (C)
+1.2
+0.2
-3.3
-2.4
-0.5
carbon source
a-Ketoglutaric (C)
+0.4
+0.2
-4.4
+0.2
-0.9
carbon source
D-Galactose (C)
+0.2
-0.3
-4.1
-0.7
+0.6
carbon source
L-Histidine (C)
-0.1
-0.2
-4.1
-0.4
+0.7
carbon source
succinate (C)
+0.3
+0.2
-4.3
-0.6
+0.2
nitrogen source
L-Glutamine (N)
+0.2
+0.5
-3.8
-0.8
+0.1
carbon source
L-Arabinose (C)
+0.2
+0.8
-3.7
-1.1
+0.2
carbon source
L-Lactate (C)
+0.0
+0.7
-4.7
+0.2
+0.6
carbon source
L-Glutamine (C)
-0.1
-0.7
-4.2
+1.7
+0.2
carbon source
L-Glutamine (C)
+0.2
+0.1
-4.7
+2.2
+0.4
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