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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_932 and PfGW456L13_933 are separated by 148 nucleotides
PfGW456L13_933 and PfGW456L13_934 are separated by 305 nucleotides
PfGW456L13_934 and PfGW456L13_935 are separated by 145 nucleotides
PfGW456L13_935 and PfGW456L13_936 are separated by 102 nucleotides
PfGW456L13_932 - Putrescine transport system permease protein PotI (TC 3.A.1.11.2), at 1,044,751 to 1,045,641
_932
PfGW456L13_933 - FIG00956490: hypothetical protein, at 1,045,790 to 1,046,431
_933
PfGW456L13_934 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 1,046,737 to 1,047,702
_934
PfGW456L13_935 - Penicillin acylase II (EC 3.5.1.11), at 1,047,848 to 1,050,247
_935
PfGW456L13_936 - Thiol-disulfide isomerase and thioredoxins, at 1,050,350 to 1,050,931
_936
Group
Condition
PfGW456L13
_932
PfGW456L13
_933
PfGW456L13
_934
PfGW456L13
_935
PfGW456L13
_936
nitrogen source
Putrescine (N)
-4.4
-0.2
+0.0
+0.2
+0.0
carbon source
Putrescine (C)
-2.3
-0.2
-0.1
-0.4
-0.3
nitrogen source
D-Serine (N)
-2.4
-0.4
-0.1
+0.0
+0.3
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
-1.1
-0.1
-0.1
-0.0
-0.9
nitrogen source
L-Arginine (N)
-1.7
-0.2
-0.1
+0.0
+0.0
stress
Lomefloxacin 0.0004 mM
-0.9
-0.3
-0.0
-0.1
-0.3
stress
sodium fluoride 12.5 mM
-0.7
-0.4
-0.1
-0.1
-0.0
stress
Thallium(I) acetate 0.008 mg/ml
-0.6
-0.4
-0.1
-0.1
-0.2
carbon source
D-Galactose (C)
-0.9
-0.5
-0.0
-0.1
+0.2
stress
Vancomycin 0.5 mg/ml
-0.2
-0.5
-0.1
+0.1
-0.5
carbon source
D-Serine (C)
-1.0
-0.3
-0.0
+0.2
-0.0
control
LB control
-1.2
-0.0
-0.1
+0.1
+0.3
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
-0.6
-0.3
-0.0
+0.4
-0.4
carbon source
a-Ketoglutaric (C)
-0.9
+0.2
-0.1
+0.0
-0.1
stress
nitrite 10 mM
-0.8
-0.2
-0.1
+0.2
+0.0
carbon source
L-Malic (C)
-1.2
+0.5
+0.0
-0.1
-0.1
carbon source
L-Histidine (C)
-0.7
+0.3
+0.0
-0.2
-0.2
carbon source
D-Mannose (C)
-0.8
-0.2
+0.1
-0.1
+0.3
carbon source
D-Serine (C)
-1.0
+0.3
+0.0
+0.1
-0.1
nitrogen source
L-Serine (N)
-0.7
-0.2
-0.0
-0.0
+0.3
carbon source
D-Glucose (C)
-1.6
+0.5
-0.1
+0.4
+0.2
carbon source
octanoate (C)
-1.5
+0.2
+0.1
+0.1
+0.9
control
LB control
-0.9
+0.2
+0.0
-0.0
+0.5
carbon source
D-Gluconic Acid (C)
-0.5
+0.4
+0.4
-0.1
-0.4
carbon source
Glycerol (C)
-0.8
+0.3
+0.2
-0.1
+0.4
carbon source
Trisodium citrate (C)
-0.2
+0.5
-0.3
+0.2
-0.3
control
LB control
-1.0
+0.2
-0.1
+0.2
+0.6
control
LB control
-0.9
+0.2
+0.0
+0.2
+0.5
carbon source
a-Ketoglutaric (C)
-0.9
+0.5
+0.0
+0.3
+0.8
carbon source
L-Tryptophan (C)
+1.1
-0.1
+0.1
-0.2
+0.1
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PfGW456L13_934
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