Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_90 and PfGW456L13_91 are separated by 138 nucleotidesPfGW456L13_91 and PfGW456L13_92 are separated by 66 nucleotidesPfGW456L13_92 and PfGW456L13_93 are separated by 363 nucleotidesPfGW456L13_93 and PfGW456L13_94 are separated by 21 nucleotides PfGW456L13_90 - Urease beta subunit (EC 3.5.1.5), at 100,717 to 101,022 _90 PfGW456L13_91 - Urease alpha subunit (EC 3.5.1.5), at 101,161 to 102,861 _91 PfGW456L13_92 - Leucine-rich repeat domain protein, at 102,928 to 108,069 _92 PfGW456L13_93 - ATP-binding region, ATPase-like:Histidine kinase A, N-terminal, at 108,433 to 109,560 _93 PfGW456L13_94 - Chaperone-modulator protein CbpM, at 109,582 to 109,887 _94
Group Condition PfGW456L13_90 PfGW456L13_91 PfGW456L13_92 PfGW456L13_93 PfGW456L13_94
nitrogen source Gly-Glu (N) N.D. -0.6 -0.2 -0.2 -0.3
stress KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x N.D. -0.3 -0.1 +0.1 -0.4
carbon source D-Fructose (C) N.D. -0.2 +0.0 +0.2 -0.8
nitrogen source nitrate (N) N.D. -0.4 -0.1 -0.1 -0.1
carbon source D-Lactate (C) N.D. +0.4 +0.0 -0.1 -0.8
carbon source D-Fructose (C) N.D. -0.1 +0.1 -0.2 -0.2
carbon source a-Ketoglutaric (C) N.D. -0.6 -0.0 -0.1 +0.3
carbon source L-Tryptophan (C) N.D. +0.2 -0.1 +0.1 -0.5
carbon source D-Galactose (C) N.D. +0.0 +0.1 +0.1 -0.5
carbon source Trisodium citrate (C) N.D. -0.1 +0.0 -0.6 +0.5
carbon source D-Glucosamine Hydrochloride (C) N.D. +0.3 +0.1 -0.1 -0.5
stress Vancomycin 0.25 mg/ml N.D. +0.2 +0.1 -0.2 -0.3
lb LB N.D. -0.4 +0.0 +0.1 +0.1
carbon source L-Glutamine (C) N.D. +0.3 -0.0 -0.4 +0.1
carbon source Putrescine (C) N.D. +0.3 -0.1 -0.1 -0.2
carbon source D-Mannose (C) N.D. +0.0 +0.1 +0.3 -0.4
carbon source D-Alanine (C) N.D. +0.2 +0.1 +0.0 -0.3
carbon source D-Lactate (C) N.D. -0.4 -0.1 -0.0 +0.6
nitrogen source Gly-DL-Asp (N) N.D. -0.1 -0.1 -0.3 +0.8
stress Dimethyl Sulfoxide 7.5 vol% N.D. +0.4 +0.2 +0.0 -0.1
nitrogen source L-Glutamic (N) N.D. -0.1 +0.1 +0.1 +0.4
carbon source D-Glucosamine Hydrochloride (C) N.D. -0.1 +0.0 +0.3 +0.2
carbon source L-Lactate (C) N.D. +0.2 +0.3 -0.1 +0.2
stress Aluminum chloride 5 mM N.D. -0.1 -0.0 +0.2 +0.4
stress Cisplatin 0.0125 mg/ml N.D. +0.2 -0.0 +0.1 +0.4
carbon source L-Malic (C) N.D. -0.2 +0.1 +0.3 +0.5
carbon source D-Galactose (C) N.D. -0.1 -0.0 +0.3 +0.6
carbon source L-Valine (C) N.D. +0.2 +0.1 +0.2 +0.4
carbon source L-Arabinose (C) N.D. +0.3 +0.1 +0.5 +0.1
carbon source L-Malic (C) N.D. +0.4 +0.3 +0.3 +0.1
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