Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_904 and PfGW456L13_905 are separated by 194 nucleotidesPfGW456L13_905 and PfGW456L13_906 are separated by 68 nucleotidesPfGW456L13_906 and PfGW456L13_907 are separated by 8 nucleotidesPfGW456L13_907 and PfGW456L13_908 are separated by 84 nucleotides PfGW456L13_904 - Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2), at 1,011,571 to 1,014,444 _904 PfGW456L13_905 - Ribonucleotide reductase, alpha subunit, at 1,014,639 to 1,014,956 _905 PfGW456L13_906 - Putative activity regulator of membrane protease YbbK, at 1,015,025 to 1,015,474 _906 PfGW456L13_907 - Putative stomatin/prohibitin-family membrane protease subunit YbbK, at 1,015,483 to 1,016,403 _907 PfGW456L13_908 - Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB, at 1,016,488 to 1,018,272 _908
Group Condition PfGW456L13_904 PfGW456L13_905 PfGW456L13_906 PfGW456L13_907 PfGW456L13_908
carbon source a-Ketoglutaric (C) +0.0 -0.5 -0.6 -0.3 -0.3
nitrogen source Gly-Glu (N) -0.0 -0.2 -0.8 -0.6 +0.1
carbon source Glycerol (C) +0.0 -0.3 -1.0 +0.1 -0.1
nitrogen source L-Isoleucine (N) -0.0 -0.1 -0.5 -0.1 -0.4
nitrogen source Gly-DL-Asp (N) -0.1 -0.2 -0.2 -0.4 -0.0
lb LB +0.0 -0.2 -0.4 -0.4 +0.1
carbon source L-Malic (C) -0.0 +0.1 -0.7 -0.3 +0.1
nitrogen source Cytosine (N) -0.1 +0.1 -0.6 -0.1 +0.0
carbon source D-Fructose (C) -0.1 +0.1 -1.0 +0.2 +0.2
carbon source Putrescine (C) +0.2 -0.6 -0.0 +0.4 -0.4
carbon source D-Lactate (C) -0.0 -0.3 -0.3 +0.2 +0.1
carbon source L-Glutamine (C) +0.1 -0.3 -0.3 +0.4 -0.0
nitrogen source L-Tryptophan (N) -0.1 +0.2 -0.5 +0.2 +0.1
carbon source L-Histidine (C) -0.1 +0.4 -0.4 -0.2 +0.2
carbon source a-Ketoglutaric (C) +0.1 -0.4 -0.2 +0.4 +0.2
carbon source D-Gluconic Acid (C) +0.0 -0.4 +0.6 -0.1 -0.1
carbon source D-Lactate (C) -0.1 -0.3 +0.3 +0.2 +0.1
carbon source D-Galactose (C) +0.1 +0.1 +0.5 -0.2 -0.1
nitrogen source D-Alanine (N) +0.2 -0.4 +0.5 +0.2 -0.0
stress Vancomycin 0.25 mg/ml +0.0 -0.1 -0.2 -0.2 +0.9
stress Fusidic 0.08 mg/ml +0.0 +0.0 +0.6 -0.2 +0.2
lb LB -0.1 -0.1 +0.6 +0.1 +0.1
carbon source L-Tryptophan (C) -0.1 -0.0 +0.4 +0.3 +0.1
carbon source D-Gluconic Acid (C) +0.4 -0.2 +0.5 +0.0 +0.2
stress Vancomycin 0.125 mg/ml -0.0 -0.1 +0.5 +0.1 +0.4
stress KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x +0.1 +0.1 +0.7 -0.0 +0.0
nitrogen source D-Serine (N) -0.0 +0.2 +0.7 +0.1 +0.4
stress Vancomycin 0.5 mg/ml -0.0 -0.5 +0.2 +0.4 +1.3
carbon source L-Arabinose (C) +0.0 +0.1 +0.8 +0.0 +0.5
carbon source octanoate (C) +0.2 +0.0 -0.4 +0.3 +1.5
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