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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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500 nt
PfGW456L13_883 and PfGW456L13_884 are separated by 69 nucleotides
PfGW456L13_884 and PfGW456L13_885 are separated by 29 nucleotides
PfGW456L13_885 and PfGW456L13_886 are separated by 314 nucleotides
PfGW456L13_886 and PfGW456L13_887 overlap by 25 nucleotides
PfGW456L13_883 - O-antigen acetylase, at 990,720 to 992,762
_883
PfGW456L13_884 - 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-), at 992,832 to 994,298
_884
PfGW456L13_885 - 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases / CDP-6-deoxy-delta-3,4-glucoseen reductase-like, at 994,328 to 995,266
_885
PfGW456L13_886 - ChaC-related protein, at 995,581 to 996,249
_886
PfGW456L13_887 - Glycerol-3-phosphate transporter, at 996,225 to 997,574
_887
Group
Condition
PfGW456L13
_883
PfGW456L13
_884
PfGW456L13
_885
PfGW456L13
_886
PfGW456L13
_887
carbon source
D-Glucose (C)
+0.0
N.D.
+0.4
-0.3
-0.3
nitrogen source
L-Threonine (N)
-0.1
N.D.
+0.2
-0.4
+0.2
carbon source
D-Serine (C)
+0.1
N.D.
+0.4
-0.3
+0.0
stress
Benzethonium chloride 0.0125 mM
-0.0
N.D.
-0.2
-0.1
+0.6
carbon source
L-Valine (C)
+0.5
N.D.
+0.5
-0.4
-0.1
stress
Lomefloxacin 0.0004 mM
-0.1
N.D.
-0.1
-0.1
+0.9
stress
Cephalothin 3 mg/ml
-0.1
N.D.
-0.0
+0.0
+0.9
carbon source
casaminos (C)
+0.1
N.D.
+0.1
+0.1
+0.6
stress
Dimethyl Sulfoxide 7.5 vol%
-0.1
N.D.
+0.1
+0.1
+0.7
stress
Vancomycin 0.25 mg/ml
-0.1
N.D.
+0.4
-0.1
+0.8
nitrogen source
Gly-DL-Asp (N)
+0.0
N.D.
+0.1
-0.1
+0.9
carbon source
L-Tryptophan (C)
-0.3
N.D.
+0.8
+0.1
+0.3
stress
Bacitracin 0.5 mg/ml
-0.2
N.D.
+0.3
-0.1
+1.0
stress
A22 0.04 mg/ml
-0.0
N.D.
+0.1
+0.0
+0.9
carbon source
L-Arabinose (C)
+0.1
N.D.
+0.4
+0.5
-0.0
carbon source
L-Tryptophan (C)
+0.0
N.D.
+0.7
-0.1
+0.4
carbon source
L-Malic (C)
+0.1
N.D.
+0.7
+0.1
+0.1
carbon source
Trisodium citrate (C)
+1.0
N.D.
+0.1
+0.2
-0.2
stress
Vancomycin 0.125 mg/ml
-0.2
N.D.
+0.5
-0.0
+0.8
stress
Fusidic 0.08 mg/ml
-0.1
N.D.
+0.3
-0.0
+0.9
stress
Bacitracin 1 mg/ml
-0.4
N.D.
+0.6
+0.0
+0.9
stress
Vancomycin 0.5 mg/ml
-0.2
N.D.
+0.8
-0.1
+0.7
carbon source
L-Valine (C)
+0.4
N.D.
+0.6
+0.3
-0.1
carbon source
D-Gluconic Acid (C)
+0.3
N.D.
+0.3
+0.6
-0.0
carbon source
octanoate (C)
+0.1
N.D.
+0.7
+0.3
+0.2
carbon source
D-Glucosamine Hydrochloride (C)
+0.6
N.D.
+0.6
+0.1
+0.2
stress
D-Cycloserine 0.125 mg/ml
-0.1
N.D.
+0.4
+0.3
+0.9
stress
Fusidic 0.03 mg/ml
-0.1
N.D.
-0.0
+0.2
+1.3
stress
Aluminum chloride 2.5 mM
+0.0
N.D.
+0.6
+0.2
+1.1
stress
Aluminum chloride 5 mM
-0.1
N.D.
+1.0
+0.3
+1.5
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