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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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500 nt
PfGW456L13_837 and PfGW456L13_838 are separated by 35 nucleotides
PfGW456L13_838 and PfGW456L13_839 are separated by 213 nucleotides
PfGW456L13_839 and PfGW456L13_840 are separated by 101 nucleotides
PfGW456L13_840 and PfGW456L13_841 are separated by 186 nucleotides
PfGW456L13_837 - Nitrogen regulatory protein P-II, glnK, at 946,118 to 946,456
_837
PfGW456L13_838 - Ammonium transporter, at 946,492 to 947,829
_838
PfGW456L13_839 - FIG004064: hypothetical protein, at 948,043 to 948,468
_839
PfGW456L13_840 - FIG00953808: hypothetical protein, at 948,570 to 948,893
_840
PfGW456L13_841 - Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase, at 949,080 to 949,787
_841
Group
Condition
PfGW456L13
_837
PfGW456L13
_838
PfGW456L13
_839
PfGW456L13
_840
PfGW456L13
_841
nitrogen source
NAG (N)
N.D.
-3.5
+0.1
N.D.
-0.6
nitrogen source
nitrate (N)
N.D.
-2.8
-0.9
N.D.
-0.1
nitrogen source
L-Threonine (N)
N.D.
-3.4
-0.8
N.D.
+0.5
carbon source
D-Gluconic Acid (C)
N.D.
-0.9
-1.0
N.D.
-1.7
nitrogen source
Glycine (N)
N.D.
-1.5
-0.4
N.D.
-0.1
nitrogen source
L-Tryptophan (N)
N.D.
-1.5
-0.0
N.D.
-0.5
carbon source
D-Lactate (C)
N.D.
+0.2
-1.1
N.D.
-1.0
nitrogen source
Uridine (N)
N.D.
-1.7
-0.3
N.D.
+0.1
nitrogen source
Cytosine (N)
N.D.
-1.4
-0.1
N.D.
-0.3
nitrogen source
L-Phenylalanine (N)
N.D.
-0.7
-0.5
N.D.
-0.6
carbon source
L-Glutamine (C)
N.D.
+0.1
-0.7
N.D.
-1.1
carbon source
D-Galactose (C)
N.D.
-0.3
-0.6
N.D.
-0.7
nitrogen source
L-Valine (N)
N.D.
-1.2
-0.4
N.D.
+0.0
nitrogen source
L-Citrulline (N)
N.D.
-0.9
-0.4
N.D.
-0.1
nitrogen source
Gly-DL-Asp (N)
N.D.
-1.0
+0.3
N.D.
-0.8
nitrogen source
L-Serine (N)
N.D.
-0.5
-0.8
N.D.
-0.1
nitrogen source
L-Alanine (N)
N.D.
-0.7
-0.5
N.D.
-0.1
nitrogen source
L-Isoleucine (N)
N.D.
-0.8
-0.4
N.D.
-0.1
nitrogen source
L-Aspartic Acid (N)
N.D.
-0.3
-0.5
N.D.
-0.5
nitrogen source
L-Lysine (N)
N.D.
-0.7
-0.6
N.D.
+0.0
carbon source
Trisodium citrate (C)
N.D.
-0.2
-0.7
N.D.
-0.3
nitrogen source
D-Alanine (N)
N.D.
-1.1
-0.2
N.D.
+0.0
carbon source
a-Ketoglutaric (C)
N.D.
+0.2
-0.3
N.D.
-0.7
carbon source
octanoate (C)
N.D.
-0.4
+0.7
N.D.
-0.7
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
N.D.
+0.3
-0.8
N.D.
+0.1
carbon source
succinate (C)
N.D.
-0.0
-0.8
N.D.
+0.5
carbon source
D-Galactose (C)
N.D.
+0.1
-0.7
N.D.
+0.7
carbon source
Glycerol (C)
N.D.
+0.1
-0.7
N.D.
+0.6
carbon source
L-Tryptophan (C)
N.D.
-0.0
+0.8
N.D.
-0.6
carbon source
L-Lactate (C)
N.D.
+0.6
-0.5
N.D.
+0.6
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