Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_78 and PfGW456L13_79 overlap by 4 nucleotidesPfGW456L13_79 and PfGW456L13_80 overlap by 4 nucleotidesPfGW456L13_80 and PfGW456L13_81 are separated by 312 nucleotidesPfGW456L13_81 and PfGW456L13_82 are separated by 163 nucleotides PfGW456L13_78 - ABC transporter (iron.B12.siderophore.hemin) , ATP-binding component, at 89,398 to 90,186 _78 PfGW456L13_79 - ABC transporter (iron.B12.siderophore.hemin) , periplasmic substrate-binding component, at 90,183 to 91,142 _79 PfGW456L13_80 - ABC transporter (iron.B12.siderophore.hemin) , permease component, at 91,139 to 92,149 _80 PfGW456L13_81 - Urea ABC transporter, substrate binding protein UrtA, at 92,462 to 93,727 _81 PfGW456L13_82 - Urea ABC transporter, permease protein UrtB, at 93,891 to 95,393 _82
Group Condition PfGW456L13_78 PfGW456L13_79 PfGW456L13_80 PfGW456L13_81 PfGW456L13_82
carbon source a-Ketoglutaric (C) -3.1 -0.7 -1.9 +0.2 -0.2
carbon source D-Gluconic Acid (C) -2.2 -0.3 -0.2 -0.1 +0.4
carbon source D-Glucose (C) -1.4 -0.2 -0.7 +0.1 -0.0
carbon source D,L-Lactate (C) -1.1 -0.3 -0.2 +0.1 +0.4
carbon source L-Arabinose (C) -0.2 +0.5 -1.0 -0.2 -0.0
control LB -0.5 +0.2 -0.5 -0.1 +0.1
nitrogen source nitrate (N) -0.8 +0.1 -0.2 +0.1 +0.0
carbon source D-Glucosamine Hydrochloride (C) -0.8 +0.1 +0.3 -0.3 -0.1
carbon source L-Alanine (C) -0.6 -0.3 +0.1 -0.1 +0.2
carbon source Glycerol (C) -0.5 +0.1 -0.4 -0.1 +0.3
carbon source D-Galactose (C) +0.8 -0.7 -0.3 +0.0 -0.3
carbon source D-Galactose (C) -0.9 -0.2 +0.5 -0.1 +0.3
carbon source L-Tryptophan (C) -0.4 -0.1 -0.3 +0.2 +0.3
carbon source octanoate (C) +1.0 -0.2 -0.7 +0.1 -0.3
carbon source L-Malic (C) +0.2 +0.0 -0.6 -0.0 +0.4
stress KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x +0.6 -0.4 +0.6 -0.1 -0.2
carbon source D-Alanine (C) +0.5 -0.1 -0.3 +0.1 +0.3
control LB +0.6 +0.1 -0.3 +0.0 +0.2
carbon source Putrescine (C) +0.6 -0.3 +0.0 +0.1 +0.3
carbon source D-Glucosamine Hydrochloride (C) +1.0 -0.1 +0.4 -0.3 -0.2
nitrogen source Uridine (N) +0.8 -0.1 +0.3 -0.0 -0.1
carbon source D-Lactate (C) +0.3 +0.4 +0.3 -0.2 +0.2
carbon source D-Alanine (C) +0.4 +0.1 +0.6 -0.1 +0.1
carbon source L-Valine (C) +0.6 -0.0 +0.4 +0.2 +0.0
carbon source L-Malic (C) +1.1 -0.1 +0.3 +0.2 -0.3
carbon source Glycerol (C) +0.9 +0.2 +0.2 +0.1 -0.0
carbon source D-Fructose (C) +0.3 +0.1 +0.6 +0.1 +0.4
nitrogen source Gly-DL-Asp (N) +0.9 +0.4 +0.1 +0.1 +0.0
nitrogen source D-Serine (N) +0.7 +0.4 +0.9 -0.1 -0.2
carbon source D-Fructose (C) +0.6 +0.4 +0.3 +0.2 +0.4
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