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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_78 and PfGW456L13_79 overlap by 4 nucleotides
PfGW456L13_79 and PfGW456L13_80 overlap by 4 nucleotides
PfGW456L13_80 and PfGW456L13_81 are separated by 312 nucleotides
PfGW456L13_81 and PfGW456L13_82 are separated by 163 nucleotides
PfGW456L13_78 - ABC transporter (iron.B12.siderophore.hemin) , ATP-binding component, at 89,398 to 90,186
_78
PfGW456L13_79 - ABC transporter (iron.B12.siderophore.hemin) , periplasmic substrate-binding component, at 90,183 to 91,142
_79
PfGW456L13_80 - ABC transporter (iron.B12.siderophore.hemin) , permease component, at 91,139 to 92,149
_80
PfGW456L13_81 - Urea ABC transporter, substrate binding protein UrtA, at 92,462 to 93,727
_81
PfGW456L13_82 - Urea ABC transporter, permease protein UrtB, at 93,891 to 95,393
_82
Group
Condition
PfGW456L13
_78
PfGW456L13
_79
PfGW456L13
_80
PfGW456L13
_81
PfGW456L13
_82
carbon source
a-Ketoglutaric (C)
-3.1
-0.7
-1.9
+0.2
-0.2
carbon source
D-Gluconic Acid (C)
-2.2
-0.3
-0.2
-0.1
+0.4
carbon source
D-Glucose (C)
-1.4
-0.2
-0.7
+0.1
-0.0
carbon source
D,L-Lactate (C)
-1.1
-0.3
-0.2
+0.1
+0.4
carbon source
L-Arabinose (C)
-0.2
+0.5
-1.0
-0.2
-0.0
control
LB
-0.5
+0.2
-0.5
-0.1
+0.1
nitrogen source
nitrate (N)
-0.8
+0.1
-0.2
+0.1
+0.0
carbon source
D-Glucosamine Hydrochloride (C)
-0.8
+0.1
+0.3
-0.3
-0.1
carbon source
L-Alanine (C)
-0.6
-0.3
+0.1
-0.1
+0.2
carbon source
Glycerol (C)
-0.5
+0.1
-0.4
-0.1
+0.3
carbon source
D-Galactose (C)
+0.8
-0.7
-0.3
+0.0
-0.3
carbon source
D-Galactose (C)
-0.9
-0.2
+0.5
-0.1
+0.3
carbon source
L-Tryptophan (C)
-0.4
-0.1
-0.3
+0.2
+0.3
carbon source
octanoate (C)
+1.0
-0.2
-0.7
+0.1
-0.3
carbon source
L-Malic (C)
+0.2
+0.0
-0.6
-0.0
+0.4
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
+0.6
-0.4
+0.6
-0.1
-0.2
carbon source
D-Alanine (C)
+0.5
-0.1
-0.3
+0.1
+0.3
control
LB
+0.6
+0.1
-0.3
+0.0
+0.2
carbon source
Putrescine (C)
+0.6
-0.3
+0.0
+0.1
+0.3
carbon source
D-Glucosamine Hydrochloride (C)
+1.0
-0.1
+0.4
-0.3
-0.2
nitrogen source
Uridine (N)
+0.8
-0.1
+0.3
-0.0
-0.1
carbon source
D-Lactate (C)
+0.3
+0.4
+0.3
-0.2
+0.2
carbon source
D-Alanine (C)
+0.4
+0.1
+0.6
-0.1
+0.1
carbon source
L-Valine (C)
+0.6
-0.0
+0.4
+0.2
+0.0
carbon source
L-Malic (C)
+1.1
-0.1
+0.3
+0.2
-0.3
carbon source
Glycerol (C)
+0.9
+0.2
+0.2
+0.1
-0.0
carbon source
D-Fructose (C)
+0.3
+0.1
+0.6
+0.1
+0.4
nitrogen source
Gly-DL-Asp (N)
+0.9
+0.4
+0.1
+0.1
+0.0
nitrogen source
D-Serine (N)
+0.7
+0.4
+0.9
-0.1
-0.2
carbon source
D-Fructose (C)
+0.6
+0.4
+0.3
+0.2
+0.4
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