Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_75 and PfGW456L13_76 are separated by 192 nucleotidesPfGW456L13_76 and PfGW456L13_77 are separated by 111 nucleotidesPfGW456L13_77 and PfGW456L13_78 are separated by 156 nucleotidesPfGW456L13_78 and PfGW456L13_79 overlap by 4 nucleotides PfGW456L13_75 - Putative multicopper oxidases, at 84,988 to 85,440 _75 PfGW456L13_76 - Outer membrane receptor proteins, mostly Fe transport, at 85,633 to 87,750 _76 PfGW456L13_77 - Uncharacterized iron-regulated membrane protein; Iron-uptake factor PiuB, at 87,862 to 89,241 _77 PfGW456L13_78 - ABC transporter (iron.B12.siderophore.hemin) , ATP-binding component, at 89,398 to 90,186 _78 PfGW456L13_79 - ABC transporter (iron.B12.siderophore.hemin) , periplasmic substrate-binding component, at 90,183 to 91,142 _79
Group Condition PfGW456L13_75 PfGW456L13_76 PfGW456L13_77 PfGW456L13_78 PfGW456L13_79
carbon source a-Ketoglutaric (C) -3.0 -0.3 -0.0 -0.4 +0.1
carbon source a-Ketoglutaric (C) +0.5 +0.1 +0.6 -3.1 -0.7
carbon source D-Glucose (C) -1.2 +0.1 -0.0 -1.4 -0.2
carbon source D-Gluconic Acid (C) +0.0 +0.1 +0.1 -2.2 -0.3
carbon source D,L-Lactate (C) -1.1 +0.0 +0.3 -1.1 -0.3
carbon source D-Fructose (C) -2.7 +0.0 +0.2 +0.3 +0.1
carbon source L-Arabinose (C) -1.8 +0.1 +0.0 -0.2 +0.5
carbon source D-Gluconic Acid (C) -1.1 -0.1 +0.3 -0.5 +0.0
stress KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x -0.9 -0.0 -0.2 +0.6 -0.4
carbon source Trisodium citrate (C) -0.8 -0.2 -0.1 -0.3 +0.4
carbon source D-Alanine (C) -1.3 +0.0 -0.0 +0.4 +0.1
carbon source D-Galactose (C) +0.2 +0.1 +0.4 -0.9 -0.2
carbon source D-Alanine (C) -0.9 -0.1 +0.3 +0.5 -0.1
nitrogen source L-Proline (N) -0.5 +0.0 -0.2 +0.5 -0.2
carbon source D-Glucosamine Hydrochloride (C) +0.3 +0.1 +0.1 -0.8 +0.1
carbon source L-Valine (C) -1.0 +0.1 +0.2 +0.6 -0.0
nitrogen source L-Citrulline (N) -0.5 -0.0 -0.2 +0.4 +0.4
carbon source L-Lactate (C) -0.6 +0.2 +0.2 +0.6 +0.0
carbon source D-Galactose (C) -0.1 +0.3 +0.3 +0.8 -0.7
carbon source octanoate (C) -0.5 +0.0 +0.4 +1.0 -0.2
carbon source L-Malic (C) -0.7 +0.2 +0.3 +1.1 -0.1
carbon source D-Glucosamine Hydrochloride (C) -0.2 +0.0 +0.2 +1.0 -0.1
carbon source succinate (C) +0.5 -0.1 +0.2 +0.6 -0.3
carbon source Putrescine (C) +0.7 +0.1 -0.0 +0.6 -0.3
stress Cisplatin 0.0125 mg/ml +0.5 -0.0 +0.1 +0.7 -0.1
nitrogen source D-Serine (N) +0.1 +0.2 -0.2 +0.7 +0.4
nitrogen source Gly-DL-Asp (N) +0.0 +0.2 -0.2 +0.9 +0.4
carbon source D-Fructose (C) +0.4 +0.1 -0.1 +0.6 +0.4
nitrogen source Gly-Glu (N) +1.0 +0.2 +0.1 +0.4 -0.2
carbon source D-Lactate (C) +0.8 +0.2 +0.5 +0.3 +0.4
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