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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_739 and PfGW456L13_740 are separated by 174 nucleotides
PfGW456L13_740 and PfGW456L13_741 are separated by 167 nucleotides
PfGW456L13_741 and PfGW456L13_742 are separated by 532 nucleotides
PfGW456L13_742 and PfGW456L13_743 are separated by 180 nucleotides
PfGW456L13_739 - Transcriptional regulator, AraC family, at 841,902 to 842,894
_739
PfGW456L13_740 - L-asparaginase (EC 3.5.1.1)
(from data)
, at 843,069 to 844,073
_740
PfGW456L13_741 - sodium/alanine transporter, at 844,241 to 845,692
_741
PfGW456L13_742 - Aspartate ammonia-lyase (EC 4.3.1.1), at 846,225 to 847,649
_742
PfGW456L13_743 - Transcriptional regulator, at 847,830 to 848,741
_743
Group
Condition
PfGW456L13
_739
PfGW456L13
_740
PfGW456L13
_741
PfGW456L13
_742
PfGW456L13
_743
carbon source
L-Asparagine (C)
-0.2
-3.0
-1.0
-6.2
-5.2
carbon source
L-Asparagine (C)
-0.0
-2.8
-0.9
-5.6
-4.7
carbon source
L-Glutamine (C)
+0.3
-0.4
-1.4
-3.3
-1.1
carbon source
L-Glutamine (C)
+0.3
-0.6
-1.5
-2.3
-1.5
carbon source
L-Histidine (C)
+0.4
+0.2
+0.2
-2.5
-0.8
nitrogen source
L-Asparagine (N)
+0.7
-1.1
-0.2
-1.9
+0.2
carbon source
L-Histidine (C)
+0.4
+0.3
+0.1
-1.8
-1.1
carbon source
a-Ketoglutaric (C)
-0.4
+0.0
-0.1
-1.9
+0.3
stress
Vancomycin 0.5 mg/ml
+0.2
-0.1
-0.1
-2.3
+0.6
stress
Paraquat dichloride 0.032 mg/ml
-0.1
+0.2
+0.0
-1.5
-0.0
nitrogen source
L-Glutamic (N)
+0.3
-0.1
-0.2
-0.6
-0.7
nitrogen source
D-Serine (N)
+0.2
-0.0
+0.1
-2.0
+0.4
stress
Bacitracin 1 mg/ml
-0.2
+0.0
-0.0
-1.6
+0.8
carbon source
L-Malic (C)
-0.1
+0.3
+0.1
-1.1
-0.2
nitrogen source
L-Arginine (N)
+1.1
-0.1
+0.1
-1.3
-0.3
carbon source
Trisodium citrate (C)
+0.2
+0.3
+0.1
-1.3
+0.4
carbon source
D-Lactate (C)
+0.7
+0.1
-0.2
-0.6
-0.2
carbon source
D-Glucose (C)
+1.1
+0.5
+0.1
-1.2
+0.1
carbon source
Putrescine (C)
-0.2
-0.3
+0.3
+0.5
+0.5
nitrogen source
L-Alanine (N)
+0.5
+0.2
+0.2
-0.5
+0.5
carbon source
Tween 20 (C)
+0.3
+0.2
+0.2
+0.2
+1.0
carbon source
L-Phenylalanine (C)
+0.2
+0.3
+0.3
+0.2
+1.0
stress
Aluminum chloride 2.5 mM
+0.1
+0.4
+0.3
+0.2
+1.2
stress
Dimethyl Sulfoxide 7.5 vol%
-0.0
+0.1
-0.0
+1.0
+1.2
carbon source
L-Valine (C)
+0.8
+0.1
+0.5
+0.5
+1.2
carbon source
L-Phenylalanine (C)
+0.4
+0.4
+0.5
+0.7
+1.2
carbon source
L-Valine (C)
+0.6
+0.4
+0.6
+1.2
+0.8
carbon source
octanoate (C)
+0.6
+0.6
+0.6
+2.0
+2.2
carbon source
L-Tryptophan (C)
+0.5
+1.0
+0.9
+1.9
+2.5
carbon source
L-Tryptophan (C)
+1.0
+1.1
+1.1
+1.9
+2.5
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