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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_721 and PfGW456L13_722 are separated by 138 nucleotides
PfGW456L13_722 and PfGW456L13_723 are separated by 179 nucleotides
PfGW456L13_723 and PfGW456L13_724 are separated by 138 nucleotides
PfGW456L13_724 and PfGW456L13_725 are separated by 256 nucleotides
PfGW456L13_721 - FIG00956226: hypothetical protein, at 817,006 to 817,413
_721
PfGW456L13_722 - putative membrane protein, at 817,552 to 818,430
_722
PfGW456L13_723 - FIG00959401: hypothetical protein, at 818,610 to 819,050
_723
PfGW456L13_724 - ATP-dependent DNA helicase UvrD/PcrA, at 819,189 to 821,372
_724
PfGW456L13_725 - Sensory box/GGDEF family protein, at 821,629 to 824,499
_725
Group
Condition
PfGW456L13
_721
PfGW456L13
_722
PfGW456L13
_723
PfGW456L13
_724
PfGW456L13
_725
carbon source
octanoate (C)
-0.2
-2.5
+0.7
-0.6
-0.0
carbon source
L-Tryptophan (C)
-0.4
-1.1
+0.1
-0.5
-0.4
stress
nitrate 200 mM
-0.4
-0.4
-0.0
-1.5
-0.0
carbon source
L-Tryptophan (C)
-0.7
-0.6
+0.1
-0.6
-0.5
stress
Lomefloxacin 0.0004 mM
-0.7
+0.6
-0.4
-1.4
-0.1
carbon source
L-Valine (C)
-0.5
-0.4
-0.1
-0.2
-0.3
carbon source
Trisodium citrate (C)
-0.6
-0.6
-0.0
-0.4
+0.0
carbon source
D-Glucose (C)
-0.1
-0.8
-0.2
-0.4
+0.1
carbon source
D-Galactose (C)
-0.8
-0.0
-0.1
-0.5
-0.1
carbon source
Tween 20 (C)
-0.3
-0.5
-0.2
-0.4
-0.2
carbon source
Putrescine (C)
-0.4
-0.6
-0.2
-0.2
-0.1
stress
Vancomycin 0.5 mg/ml
-0.4
+0.0
+0.3
-1.4
+0.2
stress
Cisplatin 0.0125 mg/ml
+0.1
-0.3
+0.1
-1.2
+0.0
carbon source
L-Valine (C)
-0.5
-0.3
-0.0
-0.4
-0.2
control
LB control
-0.2
-0.7
+0.0
-0.3
-0.0
carbon source
L-Phenylalanine (C)
-0.2
-0.7
+0.1
-0.4
-0.0
carbon source
D-Lactate (C)
-0.3
+0.0
-0.5
-0.3
-0.1
control
LB control
-0.2
-0.7
+0.0
-0.3
+0.0
stress
Aluminum chloride 5 mM
-0.8
-0.2
+0.0
-0.2
+0.1
lb
LB
-0.0
-1.0
+0.2
-0.3
-0.0
stress
Chloride 400 mM
-0.1
-0.2
+0.1
-0.8
-0.0
stress
Vancomycin 0.25 mg/ml
-0.2
-0.1
+0.1
-1.0
+0.1
carbon source
L-Malic (C)
-0.0
-0.9
+0.4
-0.4
-0.0
carbon source
L-Phenylalanine (C)
-0.4
-0.3
+0.3
-0.4
-0.2
carbon source
L-Histidine (C)
+0.4
-0.6
+0.1
-0.5
-0.1
stress
Bacitracin 1 mg/ml
-0.6
-0.0
+0.5
-0.6
+0.1
carbon source
L-Asparagine (C)
+0.4
-0.4
-0.0
-0.6
-0.0
nitrogen source
L-Valine (N)
-0.8
+0.3
-0.1
-0.0
+0.2
nitrogen source
D-Alanine (N)
-0.3
+0.5
-0.2
-0.2
-0.1
carbon source
a-Ketoglutaric (C)
+0.4
+0.5
+0.1
-0.3
+0.1
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PfGW456L13_721
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PfGW456L13_723
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