Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_650 and PfGW456L13_651 are separated by 57 nucleotidesPfGW456L13_651 and PfGW456L13_652 overlap by 4 nucleotidesPfGW456L13_652 and PfGW456L13_653 are separated by 22 nucleotidesPfGW456L13_653 and PfGW456L13_654 are separated by 158 nucleotides PfGW456L13_650 - Peptide deformylase (EC 3.5.1.88), at 740,887 to 741,393 _650 PfGW456L13_651 - Methionyl-tRNA formyltransferase (EC 2.1.2.9), at 741,451 to 742,410 _651 PfGW456L13_652 - Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-), at 742,407 to 743,717 _652 PfGW456L13_653 - Trk system potassium uptake protein TrkA, at 743,740 to 745,116 _653 PfGW456L13_654 - Chaperone protein YscY (Yop proteins translocation protein Y), at 745,275 to 745,589 _654
Group Condition PfGW456L13_650 PfGW456L13_651 PfGW456L13_652 PfGW456L13_653 PfGW456L13_654
stress Thallium(I) acetate 0.002 mg/ml N.D. N.D. -0.5 -0.1 -4.3
carbon source octanoate (C) N.D. N.D. -2.6 -0.2 -1.3
carbon source Trisodium citrate (C) N.D. N.D. -1.1 -1.2 -0.3
stress Vancomycin 0.5 mg/ml N.D. N.D. -0.5 -1.1 -0.7
carbon source D-Fructose (C) N.D. N.D. -0.6 -0.2 -1.3
carbon source a-Ketoglutaric (C) N.D. N.D. -0.3 -0.5 -1.2
carbon source succinate (C) N.D. N.D. -0.6 -0.1 -1.2
carbon source L-Lactate (C) N.D. N.D. -0.8 -0.8 -0.2
carbon source L-Arabinose (C) N.D. N.D. -0.5 -0.2 -1.2
carbon source D,L-Lactate (C) N.D. N.D. -0.3 -0.6 -0.9
stress Bacitracin 1 mg/ml N.D. N.D. -0.4 -1.1 -0.2
nitrogen source nitrate (N) N.D. N.D. -0.1 -0.7 -0.7
carbon source D-Gluconic Acid (C) N.D. N.D. -1.5 +0.1 -0.2
carbon source L-Tryptophan (C) N.D. N.D. -1.0 +0.3 -0.8
carbon source D-Serine (C) N.D. N.D. -1.3 -0.0 -0.1
stress Thallium(I) acetate 0.004 mg/ml N.D. N.D. +0.3 +0.9 -2.6
stress Vancomycin 0.25 mg/ml N.D. N.D. -0.3 -0.9 -0.3
nitrogen source L-Valine (N) N.D. N.D. -0.7 -0.7 +0.1
carbon source D-Gluconic Acid (C) N.D. N.D. -0.1 -1.3 +0.3
carbon source D-Lactate (C) N.D. N.D. -0.9 +0.4 -0.5
stress Lomefloxacin 0.0004 mM N.D. N.D. -1.0 +0.7 -0.6
stress Thallium(I) acetate 0.008 mg/ml N.D. N.D. +0.1 +0.5 -1.4
carbon source D-Galactose (C) N.D. N.D. -1.1 +0.0 +0.4
carbon source D-Serine (C) N.D. N.D. -1.2 +0.0 +0.5
lb LB N.D. N.D. -0.6 -0.4 +0.5
nitrogen source L-Proline (N) N.D. N.D. +0.6 -0.4 -0.6
nitrogen source L-Arginine (N) N.D. N.D. -0.9 +0.2 +0.4
nitrogen source D-Serine (N) N.D. N.D. -0.9 +0.4 +0.5
nitrogen source D-Alanine (N) N.D. N.D. -0.6 -0.2 +0.8
stress nitrate 200 mM N.D. N.D. -0.5 +1.4 +0.1
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