Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_644 and PfGW456L13_645 are separated by 13 nucleotidesPfGW456L13_645 and PfGW456L13_646 are separated by 163 nucleotidesPfGW456L13_646 and PfGW456L13_647 are separated by 98 nucleotidesPfGW456L13_647 and PfGW456L13_648 are separated by 54 nucleotides PfGW456L13_644 - Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25), at 735,103 to 735,924 _644 PfGW456L13_645 - Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3), at 735,938 to 736,852 _645 PfGW456L13_646 - Quinone oxidoreductase (EC 1.6.5.5), at 737,016 to 737,993 _646 PfGW456L13_647 - TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA, at 738,092 to 738,649 _647 PfGW456L13_648 - Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake, at 738,704 to 739,810 _648
Group Condition PfGW456L13_644 PfGW456L13_645 PfGW456L13_646 PfGW456L13_647 PfGW456L13_648
carbon source L-Glutamine (C) -6.6 N.D. -0.1 N.D. -0.1
carbon source L-Tryptophan (C) -6.4 N.D. -0.1 N.D. -0.3
carbon source D-Mannose (C) -6.4 N.D. -0.2 N.D. -0.1
carbon source L-Lactate (C) -6.0 N.D. -0.4 N.D. -0.1
carbon source Glycerol (C) -6.4 N.D. -0.2 N.D. +0.2
nitrogen source Ammonium chloride (N) -6.3 N.D. -0.0 N.D. -0.0
carbon source D-Fructose (C) -6.0 N.D. -0.1 N.D. -0.2
nitrogen source L-Proline (N) -6.4 N.D. +0.1 N.D. +0.0
carbon source succinate (C) -6.0 N.D. -0.3 N.D. +0.1
carbon source L-Tryptophan (C) -5.9 N.D. -0.1 N.D. -0.1
carbon source D,L-Lactate (C) -6.0 N.D. -0.1 N.D. -0.0
carbon source D-Glucose (C) -5.7 N.D. -0.3 N.D. -0.1
nitrogen source L-Serine (N) -6.1 N.D. +0.0 N.D. -0.0
nitrogen source D-Alanine (N) -6.1 N.D. +0.1 N.D. +0.0
carbon source L-Asparagine (C) -5.7 N.D. -0.3 N.D. -0.0
nitrogen source L-Glutamine (N) -5.9 N.D. -0.1 N.D. +0.1
nitrogen source L-Glutamic (N) -5.8 N.D. -0.1 N.D. -0.0
carbon source L-Histidine (C) -5.8 N.D. -0.2 N.D. +0.1
nitrogen source L-Lysine (N) -6.1 N.D. -0.1 N.D. +0.3
carbon source L-Glutamine (C) -5.7 N.D. -0.0 N.D. -0.2
carbon source D-Mannose (C) -5.7 N.D. -0.0 N.D. -0.2
carbon source D-Lactate (C) -5.9 N.D. +0.1 N.D. -0.1
carbon source D-Lactate (C) -6.0 N.D. -0.1 N.D. +0.3
nitrogen source D-Serine (N) -5.8 N.D. -0.0 N.D. -0.0
carbon source D-Galactose (C) -5.7 N.D. -0.2 N.D. +0.1
carbon source L-Alanine (C) -5.7 N.D. +0.0 N.D. -0.2
carbon source L-Phenylalanine (C) -5.7 N.D. -0.1 N.D. +0.0
nitrogen source L-Alanine (N) -5.6 N.D. +0.1 N.D. -0.1
nitrogen source nitrate (N) -5.6 N.D. -0.1 N.D. +0.1
carbon source a-Ketoglutaric (C) -5.6 N.D. -0.0 N.D. +0.4
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