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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_598 and PfGW456L13_599 overlap by 1 nucleotides
PfGW456L13_599 and PfGW456L13_600 overlap by 8 nucleotides
PfGW456L13_600 and PfGW456L13_601 are separated by 37 nucleotides
PfGW456L13_601 and PfGW456L13_602 are separated by 367 nucleotides
PfGW456L13_598 - Zinc uptake regulation protein ZUR, at 692,536 to 692,958
_598
PfGW456L13_599 - Zinc ABC transporter, ATP-binding protein ZnuC, at 692,958 to 693,743
_599
PfGW456L13_600 - Zinc ABC transporter, inner membrane permease protein ZnuB, at 693,736 to 694,524
_600
PfGW456L13_601 - Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1), at 694,562 to 695,278
_601
PfGW456L13_602 - Methionine ABC transporter ATP-binding protein, at 695,646 to 696,653
_602
Group
Condition
PfGW456L13
_598
PfGW456L13
_599
PfGW456L13
_600
PfGW456L13
_601
PfGW456L13
_602
stress
Vancomycin 0.5 mg/ml
-0.1
-0.6
-0.6
-2.6
-0.9
carbon source
L-Tryptophan (C)
-0.4
-0.9
-2.1
-1.0
+0.5
stress
Lomefloxacin 0.0004 mM
-0.1
-0.7
-0.6
-1.0
-1.0
carbon source
D-Lactate (C)
-1.0
-0.9
-0.9
+0.2
-0.4
stress
Vancomycin 0.25 mg/ml
-0.2
-0.1
+0.2
-1.9
-0.7
carbon source
D-Lactate (C)
-0.6
-1.1
-0.9
+0.3
-0.1
carbon source
L-Glutamine (C)
-0.3
-0.1
-0.5
-1.1
-0.3
stress
Benzethonium chloride 0.0125 mM
+0.1
-0.0
+0.1
-2.2
-0.2
carbon source
L-Tryptophan (C)
-0.1
-0.5
-1.4
-0.6
+0.6
carbon source
D-Gluconic Acid (C)
+0.4
-0.5
-1.3
-0.6
-0.0
carbon source
L-Valine (C)
-0.8
+0.1
-0.0
-0.5
-0.7
nitrogen source
D-Serine (N)
-1.2
-0.4
-1.1
+0.4
+0.4
control
LB control
-0.7
-0.4
-0.3
-0.3
-0.1
nitrogen source
L-Arginine (N)
-0.6
-0.3
-0.5
-0.5
+0.1
nitrogen source
L-Phenylalanine (N)
-0.8
-0.2
-0.3
-0.4
-0.1
carbon source
octanoate (C)
+0.8
-0.5
-1.2
-0.9
-0.0
carbon source
D-Gluconic Acid (C)
-0.4
-1.0
+0.2
-0.4
+0.1
carbon source
D,L-Lactate (C)
-1.6
+0.1
+0.1
-0.2
+0.0
carbon source
L-Phenylalanine (C)
+0.0
-0.3
-0.3
-0.9
+0.2
carbon source
L-Histidine (C)
-0.3
-0.1
-0.8
-0.3
+0.4
stress
Vancomycin 0.125 mg/ml
+0.3
-0.1
-0.0
-1.4
+0.1
carbon source
L-Lactate (C)
-0.1
+0.2
+0.2
+0.2
-1.3
stress
Bacitracin 1 mg/ml
+0.4
+0.2
+0.1
-1.2
-0.4
carbon source
D-Glucosamine Hydrochloride (C)
+0.2
+0.1
-0.3
+0.2
-0.9
carbon source
D-Fructose (C)
-0.6
+0.6
+0.1
-0.4
-0.2
carbon source
Putrescine (C)
+0.9
+0.3
+0.1
-0.7
+0.2
carbon source
L-Arabinose (C)
+0.7
+0.6
+0.4
-0.7
-0.2
stress
Aluminum chloride 2.5 mM
-0.0
-0.2
-0.3
+1.2
+0.4
carbon source
D-Alanine (C)
+0.5
+0.9
+0.8
-0.4
+0.2
carbon source
D-Alanine (C)
+1.1
+0.7
+0.7
-0.1
-0.0
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