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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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500 nt
PfGW456L13_576 and PfGW456L13_577 overlap by 19 nucleotides
PfGW456L13_577 and PfGW456L13_578 are separated by 189 nucleotides
PfGW456L13_578 and PfGW456L13_579 are separated by 54 nucleotides
PfGW456L13_579 and PfGW456L13_580 are separated by 105 nucleotides
PfGW456L13_576 - PUTATIVE ZINC PROTEASE PROTEIN, at 669,922 to 670,947
_576
PfGW456L13_577 - Fused spore maturation proteins A and B, at 670,929 to 672,158
_577
PfGW456L13_578 - Glutamate-aspartate carrier protein, at 672,348 to 673,679
_578
PfGW456L13_579 - hypothetical protein, at 673,734 to 673,859
_579
PfGW456L13_580 - hypothetical protein, at 673,965 to 674,096
_580
Group
Condition
PfGW456L13
_576
PfGW456L13
_577
PfGW456L13
_578
PfGW456L13
_579
PfGW456L13
_580
stress
Paraquat dichloride 0.032 mg/ml
+0.1
-0.2
+0.1
-1.0
-0.0
nitrogen source
Gly-DL-Asp (N)
+0.3
+0.1
-0.2
-0.9
+0.0
carbon source
octanoate (C)
+0.3
-2.2
+1.8
+0.5
-0.8
nitrogen source
L-Valine (N)
-0.1
+0.1
+0.4
-0.6
-0.3
stress
Vancomycin 0.5 mg/ml
-0.2
-1.0
+0.8
+0.1
+0.1
carbon source
D-Fructose (C)
-0.1
-0.5
+0.7
-0.5
-0.0
nitrogen source
Gly-Glu (N)
+0.3
+0.1
+0.2
-0.3
-0.6
carbon source
D-Alanine (C)
-0.0
-0.1
+0.6
-0.7
-0.2
carbon source
succinate (C)
+0.2
-0.2
+0.3
-0.5
-0.1
carbon source
L-Valine (C)
-0.2
-0.1
+0.8
-0.5
-0.3
stress
Bacitracin 1 mg/ml
-0.1
-1.1
+0.9
+0.2
+0.1
carbon source
L-Asparagine (C)
-0.4
-0.2
-0.7
+0.9
+0.3
carbon source
L-Lactate (C)
+0.2
-0.7
-0.0
+0.2
+0.3
carbon source
D-Gluconic Acid (C)
+0.4
-0.1
+0.2
+0.1
-0.6
stress
Nickel (II) chloride 1 mM
-0.2
-0.3
-0.2
+0.6
+0.1
stress
Vancomycin 0.25 mg/ml
-0.1
-0.5
+0.6
-0.0
+0.2
carbon source
L-Asparagine (C)
+0.0
-0.3
-0.9
+1.0
+0.2
carbon source
D-Glucosamine Hydrochloride (C)
-0.4
-0.2
+0.7
+0.2
-0.1
carbon source
L-Histidine (C)
+0.2
-0.4
+0.7
+0.1
-0.3
stress
Vancomycin 0.125 mg/ml
-0.3
-0.4
+0.6
+0.2
+0.1
carbon source
Trisodium citrate (C)
-0.5
-0.5
+0.9
+0.3
+0.2
stress
Chloride 400 mM
+0.2
-0.0
+0.7
+0.2
-0.4
carbon source
L-Phenylalanine (C)
-0.2
-0.1
+1.3
-0.0
-0.0
carbon source
L-Phenylalanine (C)
+0.2
+0.3
+1.1
-0.1
-0.3
carbon source
Tween 20 (C)
+0.1
+0.3
+0.9
+0.2
-0.1
nitrogen source
D-Serine (N)
+0.1
+0.9
-0.1
+0.3
+0.2
stress
Aluminum chloride 5 mM
+0.1
+0.4
+0.9
-0.1
+0.1
stress
Aluminum chloride 2.5 mM
+0.1
+0.3
+1.3
+0.2
-0.1
carbon source
L-Tryptophan (C)
+0.2
+1.0
+2.5
+1.0
-0.7
carbon source
L-Tryptophan (C)
+0.4
+0.6
+2.4
+1.0
-0.2
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