Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_55 and PfGW456L13_56 are separated by 38 nucleotidesPfGW456L13_56 and PfGW456L13_57 are separated by 82 nucleotidesPfGW456L13_57 and PfGW456L13_58 are separated by 149 nucleotidesPfGW456L13_58 and PfGW456L13_59 are separated by 127 nucleotides PfGW456L13_55 - tRNA dihydrouridine synthase B (EC 1.-.-.-), at 64,894 to 65,904 _55 PfGW456L13_56 - DNA-binding protein Fis, at 65,943 to 66,221 _56 PfGW456L13_57 - IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3), at 66,304 to 67,911 _57 PfGW456L13_58 - Phosphoribosylamine--glycine ligase (EC 6.3.4.13), at 68,061 to 69,356 _58 PfGW456L13_59 - Sensor histidine kinase/response regulator, at 69,484 to 72,234 _59
Group Condition PfGW456L13_55 PfGW456L13_56 PfGW456L13_57 PfGW456L13_58 PfGW456L13_59
carbon source Trisodium citrate (C) +0.3 N.D. N.D. N.D. -3.9
stress Dimethyl Sulfoxide 7.5 vol% +0.2 N.D. N.D. N.D. -2.9
stress Vancomycin 0.25 mg/ml -0.3 N.D. N.D. N.D. -2.4
carbon source L-Lactate (C) -0.3 N.D. N.D. N.D. -2.3
stress Vancomycin 0.5 mg/ml -0.5 N.D. N.D. N.D. -2.0
nitrogen source L-Aspartic Acid (N) +0.0 N.D. N.D. N.D. -2.4
nitrogen source Ammonium chloride (N) +0.1 N.D. N.D. N.D. -2.4
stress Vancomycin 0.125 mg/ml -0.1 N.D. N.D. N.D. -2.2
nitrogen source nitrate (N) -0.3 N.D. N.D. N.D. -2.0
carbon source D-Galactose (C) +0.1 N.D. N.D. N.D. -2.2
nitrogen source Putrescine (N) -0.0 N.D. N.D. N.D. -2.1
stress nitrite 10 mM -0.3 N.D. N.D. N.D. -1.8
stress Nickel (II) chloride 1 mM -0.0 N.D. N.D. N.D. -2.0
carbon source Putrescine (C) +0.1 N.D. N.D. N.D. -2.1
lb LB -0.5 N.D. N.D. N.D. -1.5
nitrogen source L-Histidine (N) -0.1 N.D. N.D. N.D. -1.9
stress Bacitracin 1 mg/ml -0.4 N.D. N.D. N.D. -1.6
carbon source a-Ketoglutaric (C) +0.0 N.D. N.D. N.D. -2.0
carbon source L-Asparagine (C) +0.2 N.D. N.D. N.D. -2.1
stress nitrate 200 mM +0.2 N.D. N.D. N.D. -2.2
carbon source Glycerol (C) -0.2 N.D. N.D. N.D. -1.7
nitrogen source D-Alanine (N) +0.5 N.D. N.D. N.D. -2.3
carbon source D-Gluconic Acid (C) +0.3 N.D. N.D. N.D. -1.9
carbon source D-Alanine (C) +0.6 N.D. N.D. N.D. -2.1
carbon source succinate (C) +0.4 N.D. N.D. N.D. -1.6
carbon source D-Alanine (C) +0.9 N.D. N.D. N.D. -2.0
stress Lomefloxacin 0.0004 mM +0.9 N.D. N.D. N.D. -1.0
carbon source L-Alanine (C) +0.9 N.D. N.D. N.D. -1.0
carbon source octanoate (C) +2.1 N.D. N.D. N.D. -1.2
carbon source D-Serine (C) +0.1 N.D. N.D. N.D. +2.2
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