Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_532 and PfGW456L13_533 are separated by 371 nucleotidesPfGW456L13_533 and PfGW456L13_534 overlap by 11 nucleotidesPfGW456L13_534 and PfGW456L13_535 are separated by 42 nucleotidesPfGW456L13_535 and PfGW456L13_536 are separated by 325 nucleotides PfGW456L13_532 - Alpha-ketoglutarate-dependent taurine dioxygenase (EC 1.14.11.17), at 613,288 to 614,175 _532 PfGW456L13_533 - Type I secretion system, membrane fusion protein LapC, at 614,547 to 615,911 _533 PfGW456L13_534 - Type I secretion system ATPase, LssB family LapB, at 615,901 to 618,057 _534 PfGW456L13_535 - Type I secretion system, outer membrane component LapE, at 618,100 to 619,488 _535 PfGW456L13_536 - T1SS secreted agglutinin RTX, at 619,814 to 623,119 _536
Group Condition PfGW456L13_532 PfGW456L13_533 PfGW456L13_534 PfGW456L13_535 PfGW456L13_536
carbon source Putrescine (C) -1.4 +0.3 +0.1 -0.0 -0.0
carbon source D-Glucose (C) -1.3 +0.4 +0.3 -0.4 +0.3
carbon source D-Glucosamine Hydrochloride (C) -0.4 -0.1 +0.1 -0.0 +0.0
carbon source D-Fructose (C) -0.5 -0.1 +0.3 -0.1 +0.0
carbon source D-Mannose (C) -0.2 +0.1 +0.1 -0.2 -0.1
nitrogen source L-Threonine (N) -0.2 -0.1 -0.1 +0.1 +0.2
nitrogen source L-Isoleucine (N) +0.3 -0.1 +0.1 -0.1 -0.1
carbon source Trisodium citrate (C) -0.4 +0.2 +0.2 +0.0 +0.1
carbon source L-Tryptophan (C) -0.2 +0.2 +0.2 -0.1 +0.1
carbon source L-Arabinose (C) -0.3 +0.2 +0.3 -0.1 +0.3
lb LB +0.5 -0.1 +0.0 -0.0 -0.1
carbon source D-Galactose (C) +0.1 +0.2 +0.3 -0.3 +0.2
carbon source succinate (C) +0.2 +0.1 -0.1 +0.0 +0.2
carbon source octanoate (C) -0.4 +0.4 +0.2 +0.1 +0.4
carbon source L-Malic (C) +0.4 +0.1 +0.2 +0.1 -0.1
carbon source L-Lactate (C) -0.7 +0.6 +0.5 -0.1 +0.4
carbon source L-Arabinose (C) +0.1 +0.4 +0.1 -0.1 +0.2
carbon source Glycerol (C) -0.2 +0.4 +0.2 -0.1 +0.4
carbon source D-Lactate (C) +0.1 +0.2 +0.4 -0.5 +0.6
carbon source L-Histidine (C) -0.4 +0.5 +0.3 +0.0 +0.3
carbon source D,L-Lactate (C) -0.2 +0.3 +0.4 -0.1 +0.4
carbon source Glycerol (C) -0.2 +0.3 +0.4 -0.0 +0.3
carbon source D-Galactose (C) +0.2 +0.2 +0.3 -0.2 +0.2
carbon source D-Gluconic Acid (C) -0.2 +0.4 +0.4 +0.1 +0.1
carbon source D-Fructose (C) -0.1 +0.5 +0.6 -0.4 +0.3
carbon source L-Malic (C) +0.3 +0.1 +0.2 +0.1 +0.3
carbon source a-Ketoglutaric (C) +0.1 +0.6 +0.2 -0.2 +0.3
carbon source D-Gluconic Acid (C) +0.0 +0.5 +0.7 -0.0 +0.5
carbon source L-Histidine (C) -0.1 +0.7 +0.5 +0.1 +0.6
carbon source D-Lactate (C) +0.1 +0.7 +0.7 -0.1 +0.5
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