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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_5122 and PfGW456L13_5123 are separated by 31 nucleotides
PfGW456L13_5123 and PfGW456L13_5124 are separated by 259 nucleotides
PfGW456L13_5124 and PfGW456L13_5125 are separated by 205 nucleotides
PfGW456L13_5125 and PfGW456L13_5126 are separated by 134 nucleotides
PfGW456L13_5122 - PAP2 superfamily protein, at 5,714,378 to 5,715,205
_5122
PfGW456L13_5123 - Ais protein, putative, at 5,715,237 to 5,715,908
_5123
PfGW456L13_5124 - Methyl-accepting chemotaxis protein I (serine chemoreceptor protein), at 5,716,168 to 5,718,087
_5124
PfGW456L13_5125 - FIG002188: hypothetical protein, at 5,718,293 to 5,719,666
_5125
PfGW456L13_5126 - FIG067310: hypothetical protein, at 5,719,801 to 5,721,756
_5126
Group
Condition
PfGW456L13
_5122
PfGW456L13
_5123
PfGW456L13
_5124
PfGW456L13
_5125
PfGW456L13
_5126
stress
Aluminum chloride 5 mM
-0.3
-2.5
+0.0
-0.1
-0.0
nitrogen source
L-Leucine (N)
-0.1
-0.4
-0.3
-0.0
-0.1
carbon source
octanoate (C)
-0.2
-0.2
-0.3
-0.0
-0.3
stress
Thallium(I) acetate 0.008 mg/ml
-0.1
-0.4
-0.2
-0.2
-0.1
nitrogen source
Uridine (N)
+0.0
-0.6
-0.0
-0.0
-0.2
stress
Zinc 1 mM
+0.0
-0.3
-0.3
-0.0
-0.1
carbon source
L-Histidine (C)
-0.1
-0.3
-0.3
-0.1
+0.0
carbon source
L-Arabinose (C)
-0.6
-0.0
+0.1
-0.2
-0.1
nitrogen source
Cytosine (N)
-0.2
-0.2
-0.2
-0.0
-0.0
nitrogen source
Glycine (N)
-0.1
-0.4
-0.0
-0.1
+0.0
carbon source
L-Lactate (C)
+0.3
-1.3
+0.1
+0.0
+0.1
nitrogen source
Gly-Glu (N)
-0.2
-0.4
+0.1
-0.1
-0.0
nitrogen source
nitrate (N)
+0.1
-0.5
-0.1
-0.0
-0.0
nitrogen source
NAG (N)
-0.2
+0.1
-0.3
-0.0
-0.1
carbon source
Glycerol (C)
-0.2
-0.4
+0.1
+0.1
-0.1
carbon source
D-Gluconic Acid (C)
+0.1
-0.8
+0.3
+0.1
-0.1
carbon source
a-Ketoglutaric (C)
-0.3
-0.3
+0.2
-0.1
+0.1
carbon source
D-Mannose (C)
+0.1
+0.4
-0.2
-0.2
-0.1
stress
nitrate 200 mM
-0.2
+0.4
-0.1
+0.1
-0.2
carbon source
Putrescine (C)
-0.2
+0.4
-0.4
-0.0
+0.2
stress
Chloride 400 mM
-0.3
+0.2
+0.2
-0.1
+0.0
carbon source
L-Valine (C)
-0.2
+0.3
-0.1
+0.1
+0.0
nitrogen source
Ammonium chloride (N)
-0.2
+0.2
+0.4
-0.1
-0.0
carbon source
D-Gluconic Acid (C)
+0.2
+0.4
-0.5
+0.1
+0.1
stress
Lomefloxacin 0.0004 mM
+0.4
+0.5
-0.6
+0.1
+0.0
carbon source
L-Tryptophan (C)
-0.2
+0.6
-0.1
-0.0
+0.1
control
LB control
+0.1
+0.3
+0.2
-0.1
+0.1
carbon source
L-Malic (C)
+0.2
+0.1
+0.3
-0.1
+0.2
carbon source
D-Galactose (C)
-0.1
+0.7
+0.2
-0.1
+0.0
control
LB
+0.1
+0.4
+0.1
+0.2
+0.1
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