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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_5069 and PfGW456L13_5070 are separated by 207 nucleotides
PfGW456L13_5070 and PfGW456L13_5071 are separated by 162 nucleotides
PfGW456L13_5071 and PfGW456L13_5072 are separated by 128 nucleotides
PfGW456L13_5072 and PfGW456L13_5073 are separated by 176 nucleotides
PfGW456L13_5069 - Iron-uptake factor PiuC, at 5,650,034 to 5,650,714
_5069
PfGW456L13_5070 - Ferrichrome-iron receptor, at 5,650,922 to 5,653,246
_5070
PfGW456L13_5071 - Uncharacterized iron-regulated membrane protein; Iron-uptake factor PiuB, at 5,653,409 to 5,655,937
_5071
PfGW456L13_5072 - Phosphodiesterase/alkaline phosphatase D, at 5,656,066 to 5,657,607
_5072
PfGW456L13_5073 - PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69), at 5,657,784 to 5,659,523
_5073
Group
Condition
PfGW456L13
_5069
PfGW456L13
_5070
PfGW456L13
_5071
PfGW456L13
_5072
PfGW456L13
_5073
carbon source
D-Fructose (C)
-0.2
-0.0
-0.2
-0.1
-3.9
carbon source
D-Mannose (C)
-0.4
+0.0
+0.0
-0.1
-3.4
carbon source
D-Mannose (C)
-0.0
+0.1
-0.2
+0.0
-3.2
carbon source
D-Fructose (C)
+0.7
-0.0
-0.2
+0.3
-3.0
carbon source
D-Gluconic Acid (C)
-1.4
-0.5
-0.2
-0.1
-0.1
carbon source
a-Ketoglutaric (C)
-1.3
-0.2
-0.3
-0.0
-0.1
carbon source
succinate (C)
-1.2
+0.1
-0.2
-0.3
-0.1
carbon source
D-Glucosamine Hydrochloride (C)
-0.4
-0.0
+0.0
-0.2
-0.8
nitrogen source
Ammonium chloride (N)
-1.0
+0.0
-0.3
+0.1
-0.3
carbon source
D-Lactate (C)
-0.3
-0.3
-0.5
-0.2
-0.1
carbon source
L-Lactate (C)
-0.6
-0.3
-0.8
+0.2
+0.3
carbon source
D-Glucosamine Hydrochloride (C)
-0.2
-0.1
-0.1
-0.1
-0.8
nitrogen source
NAG (N)
-0.5
-0.0
-0.1
+0.0
-0.7
carbon source
a-Ketoglutaric (C)
-0.6
-0.0
-0.4
-0.3
+0.2
carbon source
D-Galactose (C)
-0.5
-0.1
-0.1
-0.0
-0.3
nitrogen source
L-Lysine (N)
-0.4
-0.0
-0.2
+0.1
-0.4
carbon source
L-Glutamine (C)
-0.2
-0.3
-0.4
+0.0
-0.2
carbon source
L-Phenylalanine (C)
-0.7
-0.0
-0.1
+0.0
-0.1
nitrogen source
L-Citrulline (N)
-0.9
-0.0
+0.1
-0.0
-0.1
nitrogen source
L-Arginine (N)
-0.7
-0.0
+0.0
+0.1
-0.3
carbon source
L-Arabinose (C)
-0.8
-0.0
-0.1
+0.1
-0.1
carbon source
D-Lactate (C)
-0.4
-0.3
-0.2
-0.1
+0.1
nitrogen source
Gly-Glu (N)
-0.9
-0.2
-0.0
+0.3
-0.1
nitrogen source
D-Serine (N)
-0.3
+0.0
+0.1
-0.1
-0.5
carbon source
D,L-Lactate (C)
-0.2
-0.2
-0.5
+0.2
+0.1
carbon source
Putrescine (C)
-0.7
+0.1
+0.0
+0.4
-0.1
carbon source
D-Galactose (C)
+0.6
-0.1
+0.1
-0.1
-0.3
carbon source
Trisodium citrate (C)
+0.2
-0.1
+0.6
-0.1
-0.3
carbon source
octanoate (C)
+0.6
-0.3
+0.7
-0.2
-0.1
nitrogen source
Gly-DL-Asp (N)
+0.3
+0.1
+0.1
+0.5
-0.2
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