Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_5008 and PfGW456L13_5009 are separated by 275 nucleotidesPfGW456L13_5009 and PfGW456L13_5010 overlap by 1 nucleotidesPfGW456L13_5010 and PfGW456L13_5011 are separated by 7 nucleotidesPfGW456L13_5011 and PfGW456L13_5012 are separated by 43 nucleotides PfGW456L13_5008 - Uncharacterized ABC transporter, ATP-binding protein YrbF, at 5,584,384 to 5,585,193 _5008 PfGW456L13_5009 - Arabinose 5-phosphate isomerase (EC 5.3.1.13), at 5,585,469 to 5,586,443 _5009 PfGW456L13_5010 - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45), at 5,586,443 to 5,586,967 _5010 PfGW456L13_5011 - Uncharacterized protein YrbK clustered with lipopolysaccharide transporters, at 5,586,975 to 5,587,547 _5011 PfGW456L13_5012 - LptA, protein essential for LPS transport across the periplasm, at 5,587,591 to 5,588,082 _5012
Group Condition PfGW456L13_5008 PfGW456L13_5009 PfGW456L13_5010 PfGW456L13_5011 PfGW456L13_5012
carbon source D-Galactose (C) -2.9 N.D. N.D. -5.1 N.D.
carbon source D-Glucose (C) -3.7 N.D. N.D. -4.3 N.D.
carbon source L-Malic (C) -3.7 N.D. N.D. -3.4 N.D.
carbon source D-Gluconic Acid (C) -3.8 N.D. N.D. -3.0 N.D.
carbon source Glycerol (C) -2.2 N.D. N.D. -4.6 N.D.
carbon source D-Galactose (C) -4.0 N.D. N.D. -2.7 N.D.
carbon source D-Lactate (C) -1.4 N.D. N.D. -5.0 N.D.
carbon source D-Fructose (C) -1.3 N.D. N.D. -5.1 N.D.
carbon source a-Ketoglutaric (C) -2.9 N.D. N.D. -3.3 N.D.
carbon source Trisodium citrate (C) -4.0 N.D. N.D. -2.0 N.D.
stress Lomefloxacin 0.0004 mM -3.2 N.D. N.D. -2.6 N.D.
carbon source L-Arabinose (C) -2.7 N.D. N.D. -3.1 N.D.
carbon source a-Ketoglutaric (C) -2.8 N.D. N.D. -2.8 N.D.
stress Vancomycin 0.25 mg/ml -1.6 N.D. N.D. -3.9 N.D.
carbon source L-Valine (C) -4.0 N.D. N.D. -1.3 N.D.
stress Bacitracin 1 mg/ml -3.9 N.D. N.D. -1.4 N.D.
carbon source L-Arabinose (C) -3.2 N.D. N.D. -1.8 N.D.
carbon source succinate (C) -3.5 N.D. N.D. -1.2 N.D.
carbon source D-Gluconic Acid (C) -2.4 N.D. N.D. -2.3 N.D.
carbon source D-Mannose (C) -4.0 N.D. N.D. -0.7 N.D.
carbon source L-Histidine (C) -3.2 N.D. N.D. -1.4 N.D.
stress Vancomycin 0.5 mg/ml -1.9 N.D. N.D. -2.7 N.D.
carbon source Putrescine (C) -1.7 N.D. N.D. -2.8 N.D.
carbon source Glycerol (C) -3.5 N.D. N.D. -1.0 N.D.
carbon source L-Valine (C) -3.0 N.D. N.D. -1.5 N.D.
stress Fusidic 0.08 mg/ml -3.4 N.D. N.D. -1.0 N.D.
nitrogen source L-Serine (N) -2.9 N.D. N.D. -1.3 N.D.
carbon source D,L-Lactate (C) -3.4 N.D. N.D. -0.7 N.D.
carbon source L-Asparagine (C) -4.0 N.D. N.D. +0.2 N.D.
stress Aluminum chloride 5 mM +1.8 N.D. N.D. -3.7 N.D.
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