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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_5000 and PfGW456L13_5001 are separated by 126 nucleotides
PfGW456L13_5001 and PfGW456L13_5002 are separated by 125 nucleotides
PfGW456L13_5002 and PfGW456L13_5003 are separated by 22 nucleotides
PfGW456L13_5003 and PfGW456L13_5004 are separated by 114 nucleotides
PfGW456L13_5000 - Histidinol dehydrogenase (EC 1.1.1.23), at 5,578,286 to 5,579,623
_5000
PfGW456L13_5001 - ATP phosphoribosyltransferase (EC 2.4.2.17)
(from data)
, at 5,579,750 to 5,580,385
_5001
PfGW456L13_5002 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7), at 5,580,511 to 5,581,776
_5002
PfGW456L13_5003 - YrbA protein, at 5,581,799 to 5,582,038
_5003
PfGW456L13_5004 - Uncharacterized protein YrbB, at 5,582,153 to 5,582,437
_5004
Group
Condition
PfGW456L13
_5000
PfGW456L13
_5001
PfGW456L13
_5002
PfGW456L13
_5003
PfGW456L13
_5004
carbon source
D-Gluconic Acid (C)
-6.3
-5.7
N.D.
-2.0
N.D.
nitrogen source
nitrate (N)
-5.3
-5.5
N.D.
-3.2
N.D.
carbon source
a-Ketoglutaric (C)
-5.1
-5.1
N.D.
-3.6
N.D.
carbon source
Trisodium citrate (C)
-6.4
-5.7
N.D.
-1.8
N.D.
carbon source
D-Glucose (C)
-5.9
-5.8
N.D.
-1.9
N.D.
carbon source
D-Lactate (C)
-5.7
-6.1
N.D.
-1.6
N.D.
carbon source
L-Asparagine (C)
-5.3
-5.9
N.D.
-2.1
N.D.
nitrogen source
D-Serine (N)
-5.3
-5.3
N.D.
-2.7
N.D.
carbon source
D-Lactate (C)
-5.5
-6.0
N.D.
-1.7
N.D.
nitrogen source
Uridine (N)
-5.2
-4.9
N.D.
-2.9
N.D.
nitrogen source
L-Tryptophan (N)
-5.6
-5.3
N.D.
-1.9
N.D.
nitrogen source
Putrescine (N)
-5.4
-5.8
N.D.
-1.5
N.D.
nitrogen source
Glycine (N)
-5.4
-5.8
N.D.
-1.4
N.D.
nitrogen source
L-Serine (N)
-4.7
-4.7
N.D.
-3.1
N.D.
carbon source
D-Serine (C)
-5.3
-5.7
N.D.
-1.5
N.D.
carbon source
D-Galactose (C)
-5.5
-5.3
N.D.
-1.6
N.D.
carbon source
L-Lactate (C)
-5.2
-5.9
N.D.
-1.3
N.D.
carbon source
succinate (C)
-5.4
-6.0
N.D.
-1.0
N.D.
nitrogen source
Cytosine (N)
-4.9
-5.8
N.D.
-1.5
N.D.
nitrogen source
L-Lysine (N)
-5.1
-5.3
N.D.
-1.7
N.D.
nitrogen source
L-Glutamine (N)
-5.2
-5.5
N.D.
-1.3
N.D.
nitrogen source
L-Citrulline (N)
-3.6
-4.0
N.D.
-4.4
N.D.
carbon source
L-Asparagine (C)
-5.6
-5.5
N.D.
-0.9
N.D.
carbon source
L-Malic (C)
-5.2
-6.0
N.D.
-0.7
N.D.
carbon source
L-Alanine (C)
-5.2
-5.8
N.D.
-0.8
N.D.
carbon source
L-Phenylalanine (C)
-5.4
-5.9
N.D.
-0.4
N.D.
carbon source
D-Fructose (C)
-5.3
-5.1
N.D.
-1.3
N.D.
carbon source
Glycerol (C)
-5.6
-6.0
N.D.
+0.6
N.D.
carbon source
Glycerol (C)
-5.4
-5.9
N.D.
+0.9
N.D.
carbon source
L-Phenylalanine (C)
-5.6
-5.6
N.D.
+1.0
N.D.
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