Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_4981 and PfGW456L13_4982 are separated by 248 nucleotidesPfGW456L13_4982 and PfGW456L13_4983 are separated by 179 nucleotidesPfGW456L13_4983 and PfGW456L13_4984 are separated by 314 nucleotidesPfGW456L13_4984 and PfGW456L13_4985 are separated by 60 nucleotides PfGW456L13_4981 - Type III effector HopPmaJ, at 5,559,422 to 5,559,760 _4981 PfGW456L13_4982 - Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19), at 5,560,009 to 5,561,259 _4982 PfGW456L13_4983 - Thioredoxin reductase (EC 1.8.1.9), at 5,561,439 to 5,562,395 _4983 PfGW456L13_4984 - Sulfate transporter, CysZ-type, at 5,562,710 to 5,563,462 _4984 PfGW456L13_4985 - Glycosyl transferase, group 1 family protein, at 5,563,523 to 5,564,698 _4985
Group Condition PfGW456L13_4981 PfGW456L13_4982 PfGW456L13_4983 PfGW456L13_4984 PfGW456L13_4985
carbon source L-Arabinose (C) -2.1 -0.1 N.D. -0.3 +0.2
carbon source Trisodium citrate (C) -1.5 -0.1 N.D. -0.3 +0.1
carbon source D,L-Lactate (C) -1.8 +0.1 N.D. +0.4 -0.2
stress Lomefloxacin 0.0004 mM -0.8 -0.0 N.D. -0.3 -0.3
carbon source L-Asparagine (C) -0.7 -0.3 N.D. -0.0 -0.2
carbon source D-Serine (C) -0.4 -0.3 N.D. -0.1 -0.3
carbon source Tween 20 (C) -0.7 -0.2 N.D. -0.2 +0.0
nitrogen source Putrescine (N) -1.1 +0.3 N.D. +0.0 -0.1
carbon source D-Glucose (C) -0.6 -0.5 N.D. +0.0 +0.1
carbon source L-Valine (C) -0.9 +0.1 N.D. +0.2 -0.2
nitrogen source D-Serine (N) +0.1 -0.1 N.D. -0.4 -0.4
carbon source L-Malic (C) -0.3 +0.4 N.D. -0.7 -0.2
carbon source D-Fructose (C) -0.4 -0.5 N.D. +0.2 -0.1
carbon source D-Gluconic Acid (C) -1.1 +0.1 N.D. -0.0 +0.3
carbon source Putrescine (C) -0.7 -0.1 N.D. -0.2 +0.3
nitrogen source nitrate (N) +0.2 -0.2 N.D. -0.4 -0.2
carbon source L-Glutamine (C) -0.6 +0.2 N.D. -0.2 +0.1
stress Aluminum chloride 5 mM -0.5 +0.2 N.D. -0.2 -0.1
carbon source D-Galactose (C) -0.4 +0.2 N.D. -0.1 -0.3
stress Fusidic 0.08 mg/ml -0.9 +0.2 N.D. +0.2 +0.2
stress Paraquat dichloride 0.032 mg/ml -0.6 -0.1 N.D. +0.2 +0.2
carbon source D-Glucosamine Hydrochloride (C) -0.6 +0.6 N.D. +0.1 -0.2
carbon source succinate (C) -0.5 +0.4 N.D. +0.1 +0.0
control LB control +0.5 +0.1 N.D. -0.4 -0.1
carbon source L-Arabinose (C) +0.6 -0.1 N.D. +0.1 -0.2
nitrogen source L-Leucine (N) +0.7 -0.0 N.D. -0.4 +0.1
carbon source Glycerol (C) +0.4 -0.4 N.D. +0.3 +0.1
carbon source L-Lactate (C) +0.2 -0.2 N.D. +0.6 +0.4
carbon source D-Lactate (C) +1.2 -0.2 N.D. +0.6 -0.2
carbon source octanoate (C) +1.1 +0.2 N.D. +0.3 +0.2
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