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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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500 nt
PfGW456L13_495 and PfGW456L13_5162 are separated by 348 nucleotides
PfGW456L13_5162 and PfGW456L13_496 are separated by 817 nucleotides
PfGW456L13_496 and PfGW456L13_497 are separated by 496 nucleotides
PfGW456L13_497 and PfGW456L13_498 are separated by 233 nucleotides
PfGW456L13_495 - Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20)
(from data)
, at 566,952 to 568,394
_495
PfGW456L13_5162 - tRNA-Arg-CCG, at 568,743 to 568,816
_5162
PfGW456L13_496 - hypothetical protein, at 569,634 to 569,900
_496
PfGW456L13_497 - hypothetical protein, at 570,397 to 573,048
_497
PfGW456L13_498 - hypothetical protein, at 573,282 to 573,491
_498
Group
Condition
PfGW456L13
_495
PfGW456L13
_5162
PfGW456L13
_496
PfGW456L13
_497
PfGW456L13
_498
carbon source
D-Lactate (C)
-0.2
N.D.
-0.0
-0.2
-4.4
carbon source
a-Ketoglutaric (C)
-0.2
N.D.
+0.0
+0.2
-4.0
carbon source
D-Gluconic Acid (C)
-0.4
N.D.
-0.2
+0.4
-2.7
carbon source
D-Serine (C)
-0.6
N.D.
+0.0
+0.2
-2.3
stress
Chloride 400 mM
-0.3
N.D.
-0.2
+0.1
-2.2
carbon source
a-Ketoglutaric (C)
+0.0
N.D.
+0.6
-0.1
-2.8
carbon source
D-Fructose (C)
-0.4
N.D.
+0.1
+0.2
-1.8
carbon source
L-Malic (C)
+0.1
N.D.
-0.2
-0.1
-1.6
carbon source
D,L-Lactate (C)
-0.3
N.D.
-0.3
-0.3
-0.8
carbon source
D-Gluconic Acid (C)
-0.3
N.D.
-0.8
-0.0
-0.4
carbon source
D-Alanine (C)
-0.3
N.D.
+0.0
-0.1
-1.1
nitrogen source
L-Serine (N)
-0.8
N.D.
-0.1
-0.0
-0.5
carbon source
octanoate (C)
-1.0
N.D.
+0.1
+0.2
-0.7
nitrogen source
D-Alanine (N)
-0.4
N.D.
-0.2
-0.2
-0.6
carbon source
D-Serine (C)
-0.6
N.D.
+0.1
+0.2
-0.7
nitrogen source
L-Phenylalanine (N)
-0.1
N.D.
+0.1
+0.1
-1.0
nitrogen source
D-Serine (N)
-0.9
N.D.
-0.1
+0.4
-0.2
control
LB control
+0.1
N.D.
-0.1
+0.1
-1.0
nitrogen source
L-Lysine (N)
-1.3
N.D.
-0.1
+0.0
+0.6
carbon source
D-Lactate (C)
-0.3
N.D.
-0.5
+0.4
-0.2
carbon source
L-Tryptophan (C)
-0.7
N.D.
+0.3
+0.2
+0.1
nitrogen source
L-Valine (N)
-0.6
N.D.
-0.1
-0.2
+0.8
carbon source
L-Tryptophan (C)
-0.9
N.D.
+0.4
+0.3
+0.9
carbon source
L-Valine (C)
-0.3
N.D.
-0.0
-0.1
+1.2
carbon source
D-Fructose (C)
-0.1
N.D.
+0.1
-0.1
+1.0
carbon source
L-Lactate (C)
-0.0
N.D.
+0.3
-0.1
+0.9
carbon source
casaminos (C)
-0.0
N.D.
+0.2
-0.1
+1.0
stress
Paraquat dichloride 0.032 mg/ml
+1.0
N.D.
+0.0
-0.0
+0.2
carbon source
Putrescine (C)
+0.7
N.D.
-0.2
+0.1
+1.0
carbon source
D-Glucose (C)
-0.2
N.D.
+0.3
+0.4
+1.7
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