Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_4953 and PfGW456L13_4954 are separated by 135 nucleotidesPfGW456L13_4954 and PfGW456L13_4955 are separated by 309 nucleotidesPfGW456L13_4955 and PfGW456L13_4956 overlap by 4 nucleotidesPfGW456L13_4956 and PfGW456L13_4957 are separated by 276 nucleotides PfGW456L13_4953 - Glycine cleavage system transcriptional activator, at 5,531,935 to 5,532,882 _4953 PfGW456L13_4954 - L-serine ammonia-lyase (EC 4.3.1.17) (from data), at 5,533,018 to 5,534,394 _4954 PfGW456L13_4955 - FIG00954638: hypothetical protein, at 5,534,704 to 5,535,018 _4955 PfGW456L13_4956 - FIG00954263: hypothetical protein, at 5,535,015 to 5,535,515 _4956 PfGW456L13_4957 - FIG00957554: hypothetical protein, at 5,535,792 to 5,536,142 _4957
Group Condition PfGW456L13_4953 PfGW456L13_4954 PfGW456L13_4955 PfGW456L13_4956 PfGW456L13_4957
nitrogen source L-Serine (N) -2.2 -4.7 -0.4 -0.1 +0.2
carbon source Trisodium citrate (C) +0.1 +0.1 -3.5 +0.3 -0.7
stress Lomefloxacin 0.0004 mM -0.3 +0.0 -2.0 +0.2 -0.9
carbon source L-Valine (C) -0.0 -0.0 -2.1 -0.1 +0.0
nitrogen source L-Tryptophan (N) -0.1 -0.0 -1.4 -0.1 -0.2
nitrogen source Putrescine (N) -0.1 +0.1 -1.6 -0.2 +0.1
nitrogen source L-Asparagine (N) -0.0 -0.0 -1.5 +0.1 -0.1
carbon source D-Mannose (C) -0.0 +0.1 -1.1 +0.1 -0.4
nitrogen source D-Serine (N) -0.2 -0.9 -0.3 +0.1 +0.1
carbon source L-Arabinose (C) +0.1 -0.2 -1.1 +0.1 -0.1
nitrogen source L-Proline (N) +0.3 +0.1 -1.3 -0.1 -0.2
carbon source Putrescine (C) -0.1 -0.4 -0.4 -0.6 +0.4
carbon source D-Fructose (C) +0.2 +0.1 -0.2 -0.3 -0.8
control LB +0.2 -0.0 -1.2 -0.1 +0.1
carbon source L-Histidine (C) -0.2 +0.1 -1.0 -0.1 +0.3
stress Aluminum chloride 5 mM -0.1 +0.1 -1.1 -0.1 +0.3
carbon source D-Serine (C) -0.2 -0.8 +0.8 +0.0 -0.3
stress Cisplatin 0.0125 mg/ml +0.1 -0.1 +0.6 +0.1 -0.6
carbon source D-Serine (C) -0.1 -0.9 +1.2 +0.3 +0.0
carbon source L-Lactate (C) -0.4 +0.1 +0.7 +0.7 -0.3
carbon source L-Histidine (C) -0.2 -0.0 +1.1 -0.2 +0.1
carbon source L-Phenylalanine (C) -0.0 +0.1 +1.1 +0.0 -0.3
stress Cephalothin 3 mg/ml +0.1 +0.2 +1.3 +0.0 -0.3
carbon source L-Arabinose (C) +0.2 -0.2 +0.9 +0.4 +0.2
carbon source Glycerol (C) -0.2 +0.0 +1.9 -0.6 +0.3
carbon source succinate (C) -0.0 +0.1 +1.3 -0.0 +0.1
carbon source L-Tryptophan (C) +0.2 +0.0 +1.2 +0.1 +0.0
control LB control +0.2 +0.1 +1.0 -0.1 +0.3
carbon source D-Lactate (C) -0.4 +0.1 +1.0 +0.6 +0.1
carbon source D-Fructose (C) -0.2 +0.2 +1.3 +0.1 +0.3
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