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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_4914 and PfGW456L13_4915 are separated by 27 nucleotides
PfGW456L13_4915 and PfGW456L13_4916 are separated by 30 nucleotides
PfGW456L13_4916 and PfGW456L13_4917 overlap by 4 nucleotides
PfGW456L13_4917 and PfGW456L13_4918 are separated by 323 nucleotides
PfGW456L13_4914 - Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12), at 5,491,851 to 5,492,369
_4914
PfGW456L13_4915 - hypothetical protein, at 5,492,397 to 5,492,636
_4915
PfGW456L13_4916 - Phosphate regulon transcriptional regulatory protein PhoB (SphR), at 5,492,667 to 5,493,386
_4916
PfGW456L13_4917 - Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-), at 5,493,383 to 5,494,903
_4917
PfGW456L13_4918 - FIG00959654: hypothetical protein, at 5,495,227 to 5,495,931
_4918
Group
Condition
PfGW456L13
_4914
PfGW456L13
_4915
PfGW456L13
_4916
PfGW456L13
_4917
PfGW456L13
_4918
carbon source
D-Galactose (C)
-0.3
-0.1
+0.6
-2.5
-0.5
carbon source
octanoate (C)
-0.6
-1.4
+0.2
-0.0
-0.6
carbon source
Putrescine (C)
-0.1
-0.5
-0.6
-1.4
+0.3
carbon source
a-Ketoglutaric (C)
-0.9
+0.4
-0.5
-0.2
-0.3
carbon source
D-Gluconic Acid (C)
-0.2
-0.5
+0.3
-0.4
-0.5
carbon source
D-Lactate (C)
-1.6
-0.4
-0.3
+0.0
+0.8
carbon source
L-Alanine (C)
-0.6
+0.3
-0.1
-0.3
-0.5
stress
Aluminum chloride 5 mM
-0.6
-0.2
+0.1
-0.5
+0.1
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
-0.9
-0.4
+0.3
-0.1
+0.2
carbon source
D-Glucosamine Hydrochloride (C)
+0.2
-0.6
+0.4
-0.4
-0.2
stress
Zinc 1 mM
-0.4
-0.3
+0.2
-0.5
+0.3
carbon source
L-Tryptophan (C)
+0.4
-0.4
+0.0
-0.3
-0.3
carbon source
L-Malic (C)
+0.1
+0.1
-0.3
-0.7
+0.3
carbon source
L-Arabinose (C)
-0.4
-0.5
+0.6
+0.4
-0.5
carbon source
D-Galactose (C)
+0.2
-0.3
+0.1
-0.9
+0.4
carbon source
L-Arabinose (C)
+0.2
-0.4
+0.0
-0.8
+0.5
carbon source
L-Lactate (C)
-0.2
-0.7
+0.4
-0.2
+0.3
carbon source
D-Gluconic Acid (C)
+0.8
-0.2
-0.1
-0.8
+0.0
nitrogen source
L-Asparagine (N)
+0.3
-0.6
+0.3
+0.1
-0.3
carbon source
D-Glucose (C)
-0.0
-0.7
+0.6
-0.3
+0.3
carbon source
Glycerol (C)
+0.7
-0.3
+0.3
-0.2
-0.3
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
+0.5
-0.0
-0.3
-0.4
+0.4
nitrogen source
NAG (N)
+0.2
-0.3
+0.6
+0.1
-0.3
nitrogen source
Gly-DL-Asp (N)
+0.5
-0.7
+0.7
+0.2
+0.2
nitrogen source
Uridine (N)
+0.3
-0.4
+0.6
+0.2
+0.2
nitrogen source
L-Proline (N)
+0.1
-0.2
+0.3
+0.5
+0.4
carbon source
L-Histidine (C)
+0.7
-0.1
+0.1
+0.5
+0.3
carbon source
a-Ketoglutaric (C)
+0.5
-0.1
-0.0
+0.8
+0.1
nitrogen source
L-Glutamic (N)
+0.6
+0.1
+0.5
+0.3
-0.0
carbon source
D-Serine (C)
+0.5
+0.1
+0.4
+0.4
+0.2
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