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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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500 nt
PfGW456L13_4842 and PfGW456L13_4843 are separated by 171 nucleotides
PfGW456L13_4843 and PfGW456L13_4844 overlap by 8 nucleotides
PfGW456L13_4844 and PfGW456L13_4845 overlap by 4 nucleotides
PfGW456L13_4845 and PfGW456L13_4846 overlap by 15 nucleotides
PfGW456L13_4842 - Translation elongation factor LepA, at 5,409,372 to 5,411,171
_4842
PfGW456L13_4843 - FIG000906: Predicted Permease, at 5,411,343 to 5,412,404
_4843
PfGW456L13_4844 - FIG000988: Predicted permease, at 5,412,397 to 5,413,515
_4844
PfGW456L13_4845 - hypothetical protein, at 5,413,512 to 5,413,889
_4845
PfGW456L13_4846 - Cytosol aminopeptidase PepA (EC 3.4.11.1), at 5,413,875 to 5,415,398
_4846
Group
Condition
PfGW456L13
_4842
PfGW456L13
_4843
PfGW456L13
_4844
PfGW456L13
_4845
PfGW456L13
_4846
carbon source
D-Gluconic Acid (C)
-3.1
N.D.
N.D.
-1.1
-0.4
stress
Aluminum chloride 2.5 mM
-0.9
N.D.
N.D.
-0.7
-2.5
nitrogen source
L-Lysine (N)
-2.0
N.D.
N.D.
-0.3
-1.7
carbon source
D,L-Lactate (C)
-3.5
N.D.
N.D.
-0.3
-0.2
carbon source
L-Asparagine (C)
-3.3
N.D.
N.D.
-0.3
-0.3
carbon source
D-Glucose (C)
-2.6
N.D.
N.D.
-0.7
-0.6
carbon source
L-Valine (C)
-1.7
N.D.
N.D.
-0.2
-1.9
carbon source
D-Galactose (C)
-2.8
N.D.
N.D.
-0.4
-0.5
nitrogen source
Ammonium chloride (N)
-3.1
N.D.
N.D.
-0.4
-0.3
carbon source
D-Lactate (C)
-2.9
N.D.
N.D.
-0.6
-0.1
carbon source
L-Histidine (C)
-2.7
N.D.
N.D.
-0.2
-0.6
carbon source
D-Gluconic Acid (C)
-1.9
N.D.
N.D.
-0.6
-0.9
carbon source
a-Ketoglutaric (C)
-2.7
N.D.
N.D.
-0.4
-0.3
carbon source
L-Tryptophan (C)
-2.9
N.D.
N.D.
-0.4
+0.0
carbon source
L-Tryptophan (C)
-3.1
N.D.
N.D.
-0.2
+0.0
carbon source
D-Alanine (C)
-2.7
N.D.
N.D.
-0.1
-0.4
carbon source
L-Arabinose (C)
-2.8
N.D.
N.D.
-0.3
-0.2
carbon source
succinate (C)
-2.9
N.D.
N.D.
+0.0
-0.4
carbon source
D-Alanine (C)
-2.5
N.D.
N.D.
-0.0
-0.7
carbon source
L-Alanine (C)
-2.6
N.D.
N.D.
-0.2
-0.4
carbon source
Putrescine (C)
-2.5
N.D.
N.D.
-0.1
-0.5
carbon source
L-Glutamine (C)
-2.2
N.D.
N.D.
-0.5
-0.4
nitrogen source
L-Glutamine (N)
-2.7
N.D.
N.D.
-0.1
-0.3
carbon source
D-Mannose (C)
-2.1
N.D.
N.D.
-0.3
-0.6
carbon source
L-Lactate (C)
-2.9
N.D.
N.D.
+0.1
-0.1
nitrogen source
L-Proline (N)
-2.6
N.D.
N.D.
-0.4
+0.2
carbon source
D-Galactose (C)
-2.2
N.D.
N.D.
-0.1
-0.6
nitrogen source
L-Asparagine (N)
-2.7
N.D.
N.D.
+0.1
+0.1
carbon source
octanoate (C)
+0.5
N.D.
N.D.
-1.1
-1.5
stress
Lomefloxacin 0.0004 mM
+5.2
N.D.
N.D.
+0.2
+0.1
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