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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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500 nt
PfGW456L13_4837 and PfGW456L13_4838 are separated by 49 nucleotides
PfGW456L13_4838 and PfGW456L13_4839 are separated by 172 nucleotides
PfGW456L13_4839 and PfGW456L13_4840 overlap by 8 nucleotides
PfGW456L13_4840 and PfGW456L13_4841 are separated by 247 nucleotides
PfGW456L13_4837 - Pyridoxine 5'-phosphate synthase (EC 2.6.99.2), at 5,405,091 to 5,405,837
_4837
PfGW456L13_4838 - DNA recombination and repair protein RecO, at 5,405,887 to 5,406,570
_4838
PfGW456L13_4839 - GTP-binding protein Era, at 5,406,743 to 5,407,645
_4839
PfGW456L13_4840 - Ribonuclease III (EC 3.1.26.3), at 5,407,638 to 5,408,264
_4840
PfGW456L13_4841 - Signal peptidase I (EC 3.4.21.89), at 5,408,512 to 5,409,366
_4841
Group
Condition
PfGW456L13
_4837
PfGW456L13
_4838
PfGW456L13
_4839
PfGW456L13
_4840
PfGW456L13
_4841
stress
Cisplatin 0.0125 mg/ml
N.D.
-1.4
N.D.
N.D.
N.D.
carbon source
D-Lactate (C)
N.D.
-1.2
N.D.
N.D.
N.D.
stress
Lomefloxacin 0.0004 mM
N.D.
-1.2
N.D.
N.D.
N.D.
stress
Thallium(I) acetate 0.008 mg/ml
N.D.
-1.1
N.D.
N.D.
N.D.
stress
Vancomycin 0.5 mg/ml
N.D.
-1.1
N.D.
N.D.
N.D.
carbon source
D-Gluconic Acid (C)
N.D.
-1.0
N.D.
N.D.
N.D.
stress
nitrate 200 mM
N.D.
-0.9
N.D.
N.D.
N.D.
carbon source
D-Glucosamine Hydrochloride (C)
N.D.
-0.8
N.D.
N.D.
N.D.
stress
Nickel (II) chloride 1 mM
N.D.
-0.8
N.D.
N.D.
N.D.
stress
Vancomycin 0.25 mg/ml
N.D.
-0.8
N.D.
N.D.
N.D.
carbon source
L-Histidine (C)
N.D.
-0.7
N.D.
N.D.
N.D.
stress
Thallium(I) acetate 0.004 mg/ml
N.D.
-0.7
N.D.
N.D.
N.D.
carbon source
D-Alanine (C)
N.D.
-0.7
N.D.
N.D.
N.D.
stress
Bacitracin 1 mg/ml
N.D.
-0.6
N.D.
N.D.
N.D.
stress
nitrite 10 mM
N.D.
-0.6
N.D.
N.D.
N.D.
stress
Vancomycin 0.125 mg/ml
N.D.
-0.6
N.D.
N.D.
N.D.
stress
sodium fluoride 12.5 mM
N.D.
-0.6
N.D.
N.D.
N.D.
carbon source
L-Lactate (C)
N.D.
-0.6
N.D.
N.D.
N.D.
carbon source
Glycerol (C)
N.D.
-0.6
N.D.
N.D.
N.D.
carbon source
L-Histidine (C)
N.D.
-0.5
N.D.
N.D.
N.D.
nitrogen source
Gly-DL-Asp (N)
N.D.
-0.5
N.D.
N.D.
N.D.
carbon source
L-Arabinose (C)
N.D.
-0.5
N.D.
N.D.
N.D.
nitrogen source
L-Valine (N)
N.D.
-0.5
N.D.
N.D.
N.D.
carbon source
L-Alanine (C)
N.D.
-0.5
N.D.
N.D.
N.D.
stress
Fusidic 0.08 mg/ml
N.D.
-0.5
N.D.
N.D.
N.D.
carbon source
D-Gluconic Acid (C)
N.D.
-0.5
N.D.
N.D.
N.D.
stress
Zinc 1 mM
N.D.
-0.5
N.D.
N.D.
N.D.
carbon source
L-Phenylalanine (C)
N.D.
-0.5
N.D.
N.D.
N.D.
stress
Dimethyl Sulfoxide 7.5 vol%
N.D.
-0.5
N.D.
N.D.
N.D.
carbon source
a-Ketoglutaric (C)
N.D.
+0.5
N.D.
N.D.
N.D.
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