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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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500 nt
PfGW456L13_4835 and PfGW456L13_4836 are separated by 285 nucleotides
PfGW456L13_4836 and PfGW456L13_4837 are separated by 123 nucleotides
PfGW456L13_4837 and PfGW456L13_4838 are separated by 49 nucleotides
PfGW456L13_4838 and PfGW456L13_4839 are separated by 172 nucleotides
PfGW456L13_4835 - Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3), at 5,399,325 to 5,403,221
_4835
PfGW456L13_4836 - Transglycosylase, Slt family, at 5,403,507 to 5,404,967
_4836
PfGW456L13_4837 - Pyridoxine 5'-phosphate synthase (EC 2.6.99.2), at 5,405,091 to 5,405,837
_4837
PfGW456L13_4838 - DNA recombination and repair protein RecO, at 5,405,887 to 5,406,570
_4838
PfGW456L13_4839 - GTP-binding protein Era, at 5,406,743 to 5,407,645
_4839
Group
Condition
PfGW456L13
_4835
PfGW456L13
_4836
PfGW456L13
_4837
PfGW456L13
_4838
PfGW456L13
_4839
stress
Bacitracin 1 mg/ml
N.D.
-4.9
N.D.
-0.6
N.D.
stress
Vancomycin 0.5 mg/ml
N.D.
-3.8
N.D.
-1.1
N.D.
stress
Vancomycin 0.25 mg/ml
N.D.
-4.0
N.D.
-0.8
N.D.
stress
Fusidic 0.08 mg/ml
N.D.
-3.9
N.D.
-0.5
N.D.
stress
Vancomycin 0.125 mg/ml
N.D.
-3.7
N.D.
-0.6
N.D.
stress
Lomefloxacin 0.0004 mM
N.D.
-3.0
N.D.
-1.2
N.D.
stress
Benzethonium chloride 0.0125 mM
N.D.
-4.0
N.D.
-0.0
N.D.
carbon source
L-Histidine (C)
N.D.
-2.8
N.D.
-0.5
N.D.
carbon source
D-Serine (C)
N.D.
-2.4
N.D.
-0.5
N.D.
stress
Bacitracin 0.5 mg/ml
N.D.
-2.2
N.D.
-0.4
N.D.
carbon source
octanoate (C)
N.D.
-2.3
N.D.
-0.2
N.D.
carbon source
L-Glutamine (C)
N.D.
-2.5
N.D.
-0.1
N.D.
stress
Fusidic 0.03 mg/ml
N.D.
-2.3
N.D.
-0.2
N.D.
carbon source
L-Histidine (C)
N.D.
-1.7
N.D.
-0.7
N.D.
carbon source
D-Serine (C)
N.D.
-2.1
N.D.
-0.2
N.D.
carbon source
D-Alanine (C)
N.D.
-1.7
N.D.
-0.7
N.D.
stress
Cisplatin 0.0125 mg/ml
N.D.
-0.8
N.D.
-1.4
N.D.
carbon source
L-Glutamine (C)
N.D.
-1.8
N.D.
-0.3
N.D.
carbon source
D-Lactate (C)
N.D.
-1.0
N.D.
-1.2
N.D.
carbon source
L-Phenylalanine (C)
N.D.
-1.5
N.D.
-0.4
N.D.
carbon source
D-Alanine (C)
N.D.
-1.7
N.D.
-0.3
N.D.
carbon source
L-Phenylalanine (C)
N.D.
-1.5
N.D.
-0.5
N.D.
carbon source
D-Glucose (C)
N.D.
-1.7
N.D.
-0.2
N.D.
nitrogen source
L-Arginine (N)
N.D.
-1.6
N.D.
-0.2
N.D.
carbon source
Putrescine (C)
N.D.
-1.6
N.D.
-0.2
N.D.
carbon source
L-Arabinose (C)
N.D.
-1.2
N.D.
-0.5
N.D.
carbon source
L-Tryptophan (C)
N.D.
-1.3
N.D.
-0.4
N.D.
nitrogen source
L-Glutamine (N)
N.D.
-1.6
N.D.
+0.1
N.D.
carbon source
L-Valine (C)
N.D.
-1.5
N.D.
+0.1
N.D.
carbon source
a-Ketoglutaric (C)
N.D.
-1.2
N.D.
+0.5
N.D.
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