Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_4772 and PfGW456L13_4773 overlap by 4 nucleotidesPfGW456L13_4773 and PfGW456L13_4774 are separated by 158 nucleotidesPfGW456L13_4774 and PfGW456L13_4775 overlap by 4 nucleotidesPfGW456L13_4775 and PfGW456L13_4776 are separated by 130 nucleotides PfGW456L13_4772 - ABC transporter for L-Asparagine and possibly other L-amino acids, permease component 2 (from data), at 5,317,896 to 5,318,567 _4772 PfGW456L13_4773 - ABC transporter for L-Asparagine and possibly other L-amino acids, putative ATPase component (from data), at 5,318,564 to 5,319,298 _4773 PfGW456L13_4774 - Signal transduction histidine kinase regulating C4-dicarboxylate transport system (EC 2.7.13.3), at 5,319,457 to 5,321,358 _4774 PfGW456L13_4775 - Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake, at 5,321,355 to 5,322,683 _4775 PfGW456L13_4776 - hydrolase, alpha/beta fold family, at 5,322,814 to 5,323,815 _4776
Group Condition PfGW456L13_4772 PfGW456L13_4773 PfGW456L13_4774 PfGW456L13_4775 PfGW456L13_4776
carbon source L-Asparagine (C) -4.1 N.D. -3.3 -3.9 +0.0
carbon source L-Asparagine (C) -4.1 N.D. -2.8 -3.8 -0.2
carbon source octanoate (C) -1.6 N.D. -0.7 -0.6 -0.5
nitrogen source L-Glutamic (N) -0.9 N.D. -0.9 -1.0 -0.1
carbon source L-Malic (C) -0.2 N.D. +0.0 -0.1 -2.1
carbon source L-Tryptophan (C) -0.6 N.D. -0.4 -0.6 -0.4
carbon source Putrescine (C) -0.3 N.D. -0.2 -0.0 -1.0
carbon source L-Lactate (C) -0.4 N.D. +0.1 -0.0 -1.0
carbon source D-Fructose (C) +0.0 N.D. +0.1 -0.4 -1.1
carbon source L-Histidine (C) -0.7 N.D. -0.1 -0.4 -0.1
carbon source Trisodium citrate (C) -0.2 N.D. -0.3 -0.3 -0.5
carbon source L-Tryptophan (C) -0.0 N.D. -0.2 -0.2 -0.7
carbon source L-Valine (C) -0.3 N.D. -0.1 +0.1 -0.6
carbon source D,L-Lactate (C) +0.3 N.D. +0.0 -0.0 -0.9
carbon source D-Glucose (C) +0.2 N.D. +0.0 +0.2 -0.7
carbon source D-Glucosamine Hydrochloride (C) -0.4 N.D. -0.2 +0.2 +0.4
nitrogen source nitrate (N) +0.4 N.D. -0.0 +0.3 -0.6
carbon source D-Serine (C) -0.2 N.D. +0.9 -0.2 -0.2
stress Lomefloxacin 0.0004 mM +0.6 N.D. +0.1 -0.0 -0.3
stress Vancomycin 0.5 mg/ml +0.4 N.D. +0.2 +0.2 -0.3
carbon source D-Serine (C) +0.0 N.D. +1.0 -0.0 -0.5
nitrogen source Gly-Glu (N) +0.5 N.D. +0.1 +0.2 +0.2
carbon source succinate (C) -0.1 N.D. +0.2 +0.4 +0.6
carbon source D-Galactose (C) +0.6 N.D. -0.2 +0.2 +0.5
carbon source D-Fructose (C) +0.2 N.D. +0.2 -0.0 +0.8
carbon source casaminos (C) +0.3 N.D. +0.3 +0.5 +0.3
nitrogen source L-Aspartic Acid (N) +0.4 N.D. +0.4 +0.5 +0.2
carbon source casaminos (C) +0.3 N.D. +0.5 +0.6 +0.5
carbon source L-Glutamine (C) +3.4 N.D. +3.9 +3.9 -0.3
carbon source L-Glutamine (C) +3.7 N.D. +4.1 +4.2 -0.1
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