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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_4705 and PfGW456L13_4706 overlap by 4 nucleotides
PfGW456L13_4706 and PfGW456L13_4707 are separated by 215 nucleotides
PfGW456L13_4707 and PfGW456L13_4708 are separated by 189 nucleotides
PfGW456L13_4708 and PfGW456L13_4709 are separated by 140 nucleotides
PfGW456L13_4705 - Ribosome recycling factor, at 5,244,530 to 5,245,087
_4705
PfGW456L13_4706 - Uridine monophosphate kinase (EC 2.7.4.22), at 5,245,084 to 5,245,827
_4706
PfGW456L13_4707 - Translation elongation factor Ts, at 5,246,043 to 5,246,906
_4707
PfGW456L13_4708 - SSU ribosomal protein S2p (SAe), at 5,247,096 to 5,247,833
_4708
PfGW456L13_4709 - hypothetical protein, at 5,247,974 to 5,248,090
_4709
Group
Condition
PfGW456L13
_4705
PfGW456L13
_4706
PfGW456L13
_4707
PfGW456L13
_4708
PfGW456L13
_4709
carbon source
D-Galactose (C)
N.D.
N.D.
N.D.
N.D.
-2.4
carbon source
D-Fructose (C)
N.D.
N.D.
N.D.
N.D.
-1.1
carbon source
succinate (C)
N.D.
N.D.
N.D.
N.D.
-1.1
nitrogen source
L-Citrulline (N)
N.D.
N.D.
N.D.
N.D.
-1.0
carbon source
D-Lactate (C)
N.D.
N.D.
N.D.
N.D.
-0.8
carbon source
L-Arabinose (C)
N.D.
N.D.
N.D.
N.D.
-0.6
nitrogen source
Uridine (N)
N.D.
N.D.
N.D.
N.D.
-0.6
nitrogen source
NAG (N)
N.D.
N.D.
N.D.
N.D.
-0.6
nitrogen source
Glycine (N)
N.D.
N.D.
N.D.
N.D.
-0.6
control
LB
N.D.
N.D.
N.D.
N.D.
-0.6
carbon source
L-Tryptophan (C)
N.D.
N.D.
N.D.
N.D.
-0.6
nitrogen source
Gly-Glu (N)
N.D.
N.D.
N.D.
N.D.
-0.5
nitrogen source
D-Serine (N)
N.D.
N.D.
N.D.
N.D.
-0.5
carbon source
L-Glutamine (C)
N.D.
N.D.
N.D.
N.D.
-0.5
nitrogen source
L-Arginine (N)
N.D.
N.D.
N.D.
N.D.
-0.4
stress
Vancomycin 0.5 mg/ml
N.D.
N.D.
N.D.
N.D.
+0.4
control
LB control
N.D.
N.D.
N.D.
N.D.
+0.5
carbon source
D-Glucose (C)
N.D.
N.D.
N.D.
N.D.
+0.5
carbon source
D-Gluconic Acid (C)
N.D.
N.D.
N.D.
N.D.
+0.5
carbon source
octanoate (C)
N.D.
N.D.
N.D.
N.D.
+0.6
carbon source
Tween 20 (C)
N.D.
N.D.
N.D.
N.D.
+0.6
carbon source
D-Fructose (C)
N.D.
N.D.
N.D.
N.D.
+0.6
carbon source
L-Malic (C)
N.D.
N.D.
N.D.
N.D.
+0.6
carbon source
D-Serine (C)
N.D.
N.D.
N.D.
N.D.
+0.7
carbon source
L-Alanine (C)
N.D.
N.D.
N.D.
N.D.
+0.8
carbon source
D-Gluconic Acid (C)
N.D.
N.D.
N.D.
N.D.
+0.8
stress
Chloride 400 mM
N.D.
N.D.
N.D.
N.D.
+0.8
carbon source
a-Ketoglutaric (C)
N.D.
N.D.
N.D.
N.D.
+0.9
stress
Aluminum chloride 5 mM
N.D.
N.D.
N.D.
N.D.
+0.9
carbon source
L-Lactate (C)
N.D.
N.D.
N.D.
N.D.
+1.1
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