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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_4664 and PfGW456L13_4665 are separated by 0 nucleotides
PfGW456L13_4665 and PfGW456L13_4666 are separated by 481 nucleotides
PfGW456L13_4666 and PfGW456L13_4667 are separated by 45 nucleotides
PfGW456L13_4667 and PfGW456L13_4668 are separated by 53 nucleotides
PfGW456L13_4664 - Putative NADPH-quinone reductase (modulator of drug activity B), at 5,203,940 to 5,204,362
_4664
PfGW456L13_4665 - FIG00957354: hypothetical protein, at 5,204,363 to 5,204,557
_4665
PfGW456L13_4666 - Decarboxylase family protein, at 5,205,039 to 5,206,157
_4666
PfGW456L13_4667 - Regulatory protein RecX, at 5,206,203 to 5,206,625
_4667
PfGW456L13_4668 - RecA protein, at 5,206,679 to 5,207,737
_4668
Group
Condition
PfGW456L13
_4664
PfGW456L13
_4665
PfGW456L13
_4666
PfGW456L13
_4667
PfGW456L13
_4668
stress
Lomefloxacin 0.0004 mM
-0.2
-0.9
+0.2
-1.2
-3.6
stress
Bacitracin 1 mg/ml
-0.1
-0.8
+0.0
-0.9
-3.3
carbon source
D,L-Lactate (C)
-0.7
-2.8
+0.1
-0.4
-1.3
carbon source
D-Gluconic Acid (C)
+0.2
-0.6
-0.1
-1.3
-2.4
carbon source
L-Histidine (C)
-0.5
-0.8
+0.1
-0.7
-2.1
stress
Vancomycin 0.5 mg/ml
+0.2
-1.3
+0.2
-1.0
-2.1
carbon source
D-Glucose (C)
-0.2
-0.7
+0.1
-2.2
-0.8
stress
Cisplatin 0.0125 mg/ml
+0.1
+0.0
+0.1
-1.3
-2.5
carbon source
L-Tryptophan (C)
-0.2
-0.8
-0.0
-0.9
-1.6
stress
nitrite 10 mM
-0.3
+0.1
+0.2
-0.6
-2.8
carbon source
D-Lactate (C)
-0.5
-1.7
+0.1
-0.9
-0.2
stress
Benzethonium chloride 0.0125 mM
-0.2
+0.1
+0.1
-0.5
-2.7
stress
Chloride 400 mM
+0.1
-0.4
+0.2
-0.6
-2.4
stress
Paraquat dichloride 0.032 mg/ml
-0.0
+0.1
+0.1
-0.3
-3.0
carbon source
a-Ketoglutaric (C)
-0.5
-1.2
+0.0
+0.6
-2.1
stress
Vancomycin 0.25 mg/ml
+0.3
+0.4
+0.1
-1.2
-2.7
stress
Cobalt chloride 0.16 mM
+0.2
-1.1
-0.0
-0.1
-1.9
stress
D-Cycloserine 0.125 mg/ml
+0.5
+0.1
+0.2
-0.2
-3.5
stress
Vancomycin 0.125 mg/ml
+0.0
-0.0
+0.2
-0.4
-2.6
stress
nitrite 5 mM
-0.4
-0.7
+0.2
-0.4
-1.6
stress
Thallium(I) acetate 0.008 mg/ml
+0.2
-0.3
+0.1
-0.4
-2.4
stress
Cephalothin 3 mg/ml
-0.1
-0.4
+0.2
-0.0
-2.3
stress
nitrate 200 mM
-0.9
+0.5
+0.1
-0.5
-1.7
stress
Bacitracin 0.5 mg/ml
+0.0
+0.4
+0.3
-0.7
-2.5
stress
Fusidic 0.03 mg/ml
+0.2
-0.9
+0.1
+0.3
-2.2
stress
Fusidic 0.08 mg/ml
+0.3
-0.0
+0.3
+0.7
-2.8
carbon source
L-Glutamine (C)
+0.1
-0.4
+0.4
+0.5
-1.7
stress
Aluminum chloride 5 mM
+0.7
+0.5
+0.2
-0.3
-2.0
carbon source
a-Ketoglutaric (C)
+0.1
+1.3
-0.3
+0.7
-1.5
carbon source
Trisodium citrate (C)
+0.3
+1.0
+0.3
+0.9
-0.9
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