Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_4639 and PfGW456L13_4640 are separated by 681 nucleotidesPfGW456L13_4640 and PfGW456L13_4641 are separated by 107 nucleotidesPfGW456L13_4641 and PfGW456L13_4642 are separated by 353 nucleotidesPfGW456L13_4642 and PfGW456L13_4643 are separated by 149 nucleotides PfGW456L13_4639 - Histidine ABC transporter, ATP-binding protein HisP (TC 3.A.1.3.1), at 5,176,947 to 5,177,711 _4639 PfGW456L13_4640 - FIG00955308: hypothetical protein, at 5,178,393 to 5,178,602 _4640 PfGW456L13_4641 - Deoxycytidine triphosphate deaminase (EC 3.5.4.13), at 5,178,710 to 5,179,276 _4641 PfGW456L13_4642 - Cold shock protein CspA, at 5,179,630 to 5,179,839 _4642 PfGW456L13_4643 - Peptide chain release factor RF-3, at 5,179,989 to 5,180,945 _4643
Group Condition PfGW456L13_4639 PfGW456L13_4640 PfGW456L13_4641 PfGW456L13_4642 PfGW456L13_4643
carbon source Putrescine (C) -0.4 -2.2 -1.3 -1.9 -0.2
carbon source Trisodium citrate (C) -0.4 -2.7 -0.4 +0.4 -0.8
carbon source D-Fructose (C) -0.8 +0.5 -0.5 -1.5 -0.4
carbon source Glycerol (C) -0.7 +0.2 -1.4 -0.7 +0.0
carbon source D,L-Lactate (C) +0.1 -1.8 -0.8 +0.2 -0.0
stress Vancomycin 0.25 mg/ml +0.2 -0.3 -1.0 -1.1 -0.1
carbon source L-Asparagine (C) +0.1 +0.1 -1.6 -0.7 +0.0
carbon source D-Mannose (C) -0.2 +0.4 -1.6 -0.5 -0.2
carbon source L-Malic (C) -1.5 +1.2 -0.7 -0.6 -0.5
carbon source D-Serine (C) -1.2 +0.7 -1.4 -0.0 +0.0
carbon source D-Glucosamine Hydrochloride (C) -0.5 +0.4 -1.1 -0.5 -0.1
stress Dimethyl Sulfoxide 7.5 vol% +0.2 +0.4 -1.7 -0.7 +0.1
carbon source L-Alanine (C) -0.7 -1.1 -0.4 +0.8 -0.0
carbon source succinate (C) -1.2 +0.0 -0.6 +0.4 -0.2
nitrogen source NAG (N) -1.2 +0.6 -0.6 -0.3 -0.0
stress Vancomycin 0.5 mg/ml -0.0 +0.5 -0.2 -1.5 +0.1
carbon source L-Lactate (C) -0.4 -0.3 -0.6 +0.5 -0.5
carbon source octanoate (C) -0.5 +1.3 -1.3 -0.0 -0.6
carbon source L-Histidine (C) +0.0 +0.8 -0.8 -0.9 -0.0
nitrogen source L-Lysine (N) -0.4 +0.7 -0.6 -0.6 +0.1
nitrogen source L-Proline (N) -0.5 +0.9 -1.2 +0.2 -0.1
carbon source L-Valine (C) +0.4 -0.6 -0.9 +0.6 -0.1
nitrogen source D-Serine (N) +0.6 +0.8 -0.3 -1.6 +0.1
carbon source D-Mannose (C) -0.4 +0.9 -0.8 +0.6 +0.0
stress Aluminum chloride 2.5 mM +0.1 -0.5 -0.4 -0.1 +1.3
stress Thallium(I) acetate 0.002 mg/ml -0.6 +0.3 -0.6 +1.3 -0.1
stress nitrate 200 mM +0.1 -0.1 -0.8 +1.1 +0.4
lb LB +1.2 +0.9 -0.8 -0.6 +0.0
stress Lomefloxacin 0.0004 mM -0.1 +0.2 +3.5 -3.2 +0.4
nitrogen source nitrate (N) +0.6 +1.4 -0.5 +0.5 +0.1
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