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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_4599 and PfGW456L13_4600 are separated by 170 nucleotides
PfGW456L13_4600 and PfGW456L13_4601 are separated by 460 nucleotides
PfGW456L13_4601 and PfGW456L13_4602 are separated by 231 nucleotides
PfGW456L13_4602 and PfGW456L13_4603 overlap by 44 nucleotides
PfGW456L13_4599 - RNA polymerase associated protein RapA (EC 3.6.1.-), at 5,132,066 to 5,134,912
_4599
PfGW456L13_4600 - Major facilitator family transporter, at 5,135,083 to 5,136,432
_4600
PfGW456L13_4601 - Ferredoxin, at 5,136,893 to 5,137,066
_4601
PfGW456L13_4602 - Sensory box/GGDEF family protein, at 5,137,298 to 5,139,430
_4602
PfGW456L13_4603 - 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), at 5,139,387 to 5,140,283
_4603
Group
Condition
PfGW456L13
_4599
PfGW456L13
_4600
PfGW456L13
_4601
PfGW456L13
_4602
PfGW456L13
_4603
stress
Vancomycin 0.5 mg/ml
-1.9
-0.2
N.D.
-0.1
+0.0
nitrogen source
D-Serine (N)
-1.9
-0.0
N.D.
+0.1
+0.0
stress
Bacitracin 1 mg/ml
-1.5
-0.0
N.D.
-0.0
-0.2
carbon source
D-Gluconic Acid (C)
-0.6
+0.0
N.D.
-0.1
-0.5
stress
Lomefloxacin 0.0004 mM
-1.3
+0.2
N.D.
+0.0
+0.1
lb
LB
-0.3
-0.2
N.D.
+0.0
-0.6
carbon source
L-Valine (C)
-1.1
+0.0
N.D.
+0.0
+0.0
carbon source
octanoate (C)
-1.4
+0.2
N.D.
+0.1
+0.1
carbon source
L-Malic (C)
-0.9
-0.1
N.D.
-0.1
+0.1
carbon source
L-Phenylalanine (C)
-0.5
-0.0
N.D.
-0.1
-0.3
stress
Aluminum chloride 5 mM
-1.3
+0.2
N.D.
+0.0
+0.2
stress
Vancomycin 0.25 mg/ml
-1.2
+0.1
N.D.
+0.0
+0.3
carbon source
L-Lactate (C)
-0.7
+0.1
N.D.
-0.0
-0.2
carbon source
D-Mannose (C)
-0.6
-0.1
N.D.
-0.1
+0.0
carbon source
D-Serine (C)
-0.7
+0.0
N.D.
+0.1
-0.2
stress
Chloride 400 mM
-0.5
-0.1
N.D.
+0.1
-0.3
stress
Vancomycin 0.125 mg/ml
-0.9
+0.1
N.D.
+0.0
-0.0
stress
Bacitracin 0.5 mg/ml
-0.6
+0.0
N.D.
-0.1
-0.1
carbon source
L-Valine (C)
-0.9
+0.2
N.D.
-0.1
+0.1
stress
Fusidic 0.08 mg/ml
-0.8
+0.1
N.D.
+0.1
-0.1
stress
Thallium(I) acetate 0.004 mg/ml
-0.7
-0.1
N.D.
+0.0
+0.1
carbon source
Glycerol (C)
-0.8
+0.1
N.D.
+0.1
-0.1
carbon source
Trisodium citrate (C)
-0.6
-0.1
N.D.
-0.1
+0.1
nitrogen source
L-Serine (N)
-0.7
-0.0
N.D.
+0.1
+0.0
carbon source
a-Ketoglutaric (C)
-0.6
-0.1
N.D.
+0.3
-0.0
carbon source
succinate (C)
-0.1
-0.2
N.D.
+0.2
-0.3
carbon source
L-Tryptophan (C)
-0.8
+0.0
N.D.
+0.1
+0.3
nitrogen source
nitrate (N)
-0.2
-0.2
N.D.
-0.1
+0.4
stress
nitrite 10 mM
+0.3
+0.1
N.D.
-0.1
-0.2
carbon source
D-Fructose (C)
+0.6
-0.0
N.D.
+0.0
+0.2
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