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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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500 nt
PfGW456L13_4478 and PfGW456L13_4479 are separated by 73 nucleotides
PfGW456L13_4479 and PfGW456L13_4480 are separated by 146 nucleotides
PfGW456L13_4480 and PfGW456L13_4481 are separated by 155 nucleotides
PfGW456L13_4481 and PfGW456L13_4482 are separated by 11 nucleotides
PfGW456L13_4478 - Lactam utilization protein LamB, at 5,007,143 to 5,007,895
_4478
PfGW456L13_4479 - Sialic acid transporter (permease) NanT, at 5,007,969 to 5,009,255
_4479
PfGW456L13_4480 - Cyn operon transcriptional activator, at 5,009,402 to 5,010,316
_4480
PfGW456L13_4481 - FIG00953701: hypothetical protein, at 5,010,472 to 5,011,014
_4481
PfGW456L13_4482 - Glutamine amidotransferase, class-II, at 5,011,026 to 5,011,802
_4482
Group
Condition
PfGW456L13
_4478
PfGW456L13
_4479
PfGW456L13
_4480
PfGW456L13
_4481
PfGW456L13
_4482
carbon source
octanoate (C)
-1.9
-1.4
-0.6
-0.8
-0.4
carbon source
L-Tryptophan (C)
-1.6
-1.2
-1.1
-0.3
-0.3
carbon source
L-Tryptophan (C)
-1.8
-1.2
-0.5
-0.4
+0.2
carbon source
D-Fructose (C)
-1.0
-0.5
-0.5
-0.0
-0.4
nitrogen source
D-Serine (N)
-1.1
-0.7
+0.0
-0.2
-0.2
carbon source
D-Gluconic Acid (C)
-0.3
-0.1
-0.7
-0.5
-0.3
carbon source
L-Alanine (C)
-1.0
-0.6
-0.4
-0.1
+0.1
stress
Nickel (II) chloride 1 mM
-0.4
-0.5
-0.6
-0.3
-0.2
nitrogen source
D-Alanine (N)
-0.7
-0.2
-0.4
-0.2
-0.3
carbon source
a-Ketoglutaric (C)
-0.1
-0.4
-1.0
-0.0
-0.3
nitrogen source
L-Serine (N)
-0.6
-0.3
-0.5
-0.3
-0.1
carbon source
Trisodium citrate (C)
-0.6
-0.1
+0.2
-1.1
-0.1
carbon source
L-Valine (C)
-0.7
-0.3
-0.3
-0.1
-0.3
carbon source
L-Phenylalanine (C)
-0.6
-0.4
-0.2
-0.1
-0.2
carbon source
D-Fructose (C)
-0.8
+0.1
-0.3
+0.0
-0.5
carbon source
Tween 20 (C)
-0.5
-0.6
-0.2
-0.0
-0.2
carbon source
L-Glutamine (C)
-0.8
-0.2
-0.1
-0.2
-0.2
carbon source
D-Glucose (C)
-1.1
+0.2
+0.3
-0.2
-0.5
carbon source
L-Alanine (C)
-0.1
-0.5
-0.5
-0.1
-0.1
carbon source
L-Phenylalanine (C)
-0.4
-0.3
-0.4
+0.0
-0.2
carbon source
L-Arabinose (C)
-0.5
-0.4
+0.2
-0.4
-0.2
carbon source
a-Ketoglutaric (C)
-0.9
+0.0
-0.5
+0.4
-0.1
carbon source
L-Arabinose (C)
-0.4
+0.1
-0.3
+0.1
-0.6
carbon source
L-Valine (C)
-0.6
-0.3
-0.6
+0.2
+0.2
carbon source
succinate (C)
-0.5
+0.3
-0.1
+0.1
-0.3
nitrogen source
nitrate (N)
-0.4
-0.1
+0.6
-0.0
-0.3
carbon source
L-Lactate (C)
+0.2
+0.1
-0.1
-0.6
+0.2
stress
Lomefloxacin 0.0004 mM
+0.4
+0.1
+0.0
-0.3
+0.5
stress
Vancomycin 0.125 mg/ml
+0.4
+0.1
+0.4
+0.2
+0.2
carbon source
L-Malic (C)
+0.0
+0.2
+0.3
+0.7
+0.3
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